Evidence map›Paper›PMID 26343853›Full record

ArticleBiochimica et biophysica acta2015

A rationally designed mutant of plasma platelet-activating factor acetylhydrolase hydrolyzes the organophosphorus nerve agent soman.

Stephen D Kirby, Joseph Norris, Richard Sweeney, Brian J Bahnson, Douglas M Cerasoli

Open access · hybridAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Counteracting poisoning with chemical warfare nerve agents.Arhiv za higijenu rada i toksikologiju · 2020
    Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Stephen D KirbyU.S. Army Medical Research Institute of Chemical Defense, APG, MD 21010, United States; Department of Chemistry & Biochemistry, University of Delaware, Newark, DE 19716, United States. Electronic address: stephen.d.kirby.civ@mail.mil.
Joseph NorrisU.S. Army Medical Research Institute of Chemical Defense, APG, MD 21010, United States.
Richard SweeneyU.S. Army Medical Research Institute of Chemical Defense, APG, MD 21010, United States.
Brian J BahnsonDepartment of Chemistry & Biochemistry, University of Delaware, Newark, DE 19716, United States.
Douglas M CerasoliU.S. Army Medical Research Institute of Chemical Defense, APG, MD 21010, United States.
United States Army Medical Research Institute of Infectious Diseases · USUniversity of Delaware · US

Funding

COBRE on Membrane Protein Production and CharacterizationP30GM103519 · NIGMS · UNIVERSITY OF DELAWARE · PI LENHOFF, ABRAHAM M · 2012 to 2014
$3.3M
Structure and Interfacial Function of Platelet Activating Factor AcetylhydrolaseR01HL084366 · NHLBI · UNIVERSITY OF DELAWARE · PI BAHNSON, BRIAN J · 2007 to 2011
$1.7M
NHLBI NIH HHS 5R01HL084366NHLBI NIH HHS R01 HL084366NIGMS NIH HHS 8P30GM103519NIGMS NIH HHS P30 GM103519
6 · The paper itself

Abstract

Organophosphorus compounds (OPs) such as sarin and soman are some of the most toxic chemicals synthesized by man. They exert toxic effects by inactivating acetylcholinesterase (AChE) and bind secondary target protein. Organophosphorus compounds are hemi-substrates for enzymes of the serine hydrolase superfamily. Enzymes can be engineered by amino acid substitution into OP-hydrolyzing variants (bioscavengers) and used as therapeutics. Some enzymes associated with lipoproteins, such as human plasma platelet-activating factor acetylhydrolase (pPAF-AH), are also inhibited by OPs; these proteins have largely been ignored for engineering purposes because of complex interfacial kinetics and a lack of structural data. We have expressed active human pPAF-AH in bacteria and previously solved the crystal structure of this enzyme with OP adducts. Using these structures as a guide, we created histidine mutations near the active site of pPAF-AH (F322H, W298H, L153H) in an attempt to generate novel OP-hydrolase activity. Wild-type pPAF-AH, L153H, and F322H have essentially no hydrolytic activity against the nerve agents tested. In contrast, the W298H mutant displayed novel somanase activity with a kcat of 5min(-1) and a KM of 590μM at pH7.5. There was no selective preference for hydrolysis of any of the four soman stereoisomers.

Indexed as

1-Alkyl-2-acetylglycerophosphocholine EsteraseChemical Warfare AgentsHydrolysisMutationSoman1-Alkyl-2-acetylglycerophosphocholine EsteraseChemical Warfare AgentsSomanBioscavengerNerve agentsOrganophosphorus compoundsPlasma platelet-activating factor acetylhydrolaseSoman

Identifiers

PMID26343853
PMCPMC4632840
OpenAlexW1798232551

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.