Evidence map›Paper›PMID 26340666›Full record

ArticlePloS one2015

Transition of blaOXA-58-like to blaOXA-23-like in Acinetobacter baumannii Clinical Isolates in Southern China: An 8-Year Study.

Weiyuan Wu, Yi He, Jian Lu, Yuemei Lu, Jinsong Wu, Yingxia Liu

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Molecular Epidemiology of Carbapenem-ResistantMicrobial drug resistance (Larchmont, N.Y.) · 2022
    Article
  5. Molecular Characterization of Carbapenem-ResistantInfection and drug resistance · 2022
    Review
  6. Article
  7. Overexpression ofBioMed research international · 2020
    Article
  8. blaBMC infectious diseases · 2019
    Article
  9. Article
  10. Article
  11. Article
  12. Frontiers in microbiology · 2018
    Article
  13. Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Weiyuan WuDepartment of Laboratory Medicine, Shenzhen People's Hospital, Second Clinical Medical College of Jinan University, Key Laboratory of Pathogenic Microorganism and Bacterial Resistance Surveillance in Shenzhen, Shenzhen, Guangdong, China.
Yi HeDepartment of Infectious Disease, Third People's Hospital of Shenzhen, Shenzhen, Guangdong, China.
Jian LuDepartment of Infectious Disease, Third People's Hospital of Shenzhen, Shenzhen, Guangdong, China.
Yuemei LuDepartment of Laboratory Medicine, Shenzhen People's Hospital, Second Clinical Medical College of Jinan University, Key Laboratory of Pathogenic Microorganism and Bacterial Resistance Surveillance in Shenzhen, Shenzhen, Guangdong, China.
Jinsong WuDepartment of Laboratory Medicine, Shenzhen People's Hospital, Second Clinical Medical College of Jinan University, Key Laboratory of Pathogenic Microorganism and Bacterial Resistance Surveillance in Shenzhen, Shenzhen, Guangdong, China.
Yingxia LiuDepartment of Infectious Disease, Third People's Hospital of Shenzhen, Shenzhen, Guangdong, China.
Jinan University · CNShenzhen Third People’s Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe prevalence of carbapenem-resistant Acinetobacter baumannii in hospitals has been increasing worldwide. This study aims to investigate the carbapenemase genes and the clonal relatedness among A. baumannii clinical isolates in a Chinese hospital.

methodsCarbapenemase genes and the upstream locations of insertion sequences were detected by polymerase chain reaction (PCR), and the clonal relatedness of isolates was determined by pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing.

resultsA total of 231 nonduplicate carbapenemase gene-harboring A. baumannii clinical isolates recovered from Shenzhen People's Hospital, were investigated between 2002 and 2009. blaOXA-23-like, blaOXA-58-like, blaOXA-40-like, and ISAba1-blaOXA-51-like were identified in 119, 107, 1, and 4 isolates, respectively. IS1008-ΔISAba3, ISAba3, and ISAba1 were detected upstream of the blaOXA-58-like gene in 69, 35, and 3 isolates, respectively. All blaOXA-23-like genes but one had an upstream insertion of ISAba1. blaOXA-58-like was the most common carbapenemase gene in A.baumannii before 2008, thereafter blaOXA-23-like became rapidly prevalent and replaced blaOXA-58-like in 2009. The majority of blaOXA-58-like-carrying isolates showed lower level of resistance to imipenem and meropenem (minimum inhibitory concentrations (MICs), 1 μg/ml to 16 μg/ml), compared with the majority of blaOXA-23-like-carrying isolates (MICs, 16 μg/ml to 64 μg/ml for both imipenem and meropenem). All 231 blaOXA carbapenemase gene-harboring isolates belonged to 14 PFGE types (A-N), and three dominant clones A, J, and H accounted for 43.3%, 42.0%, and 8.2% of the tested isolates, respectively. Clone A (sequence type ST92/ST208) with blaOXA-58-like was the most prevalent before 2008. Clone H (ST229) with blaOXA-23-like became striking between 2007 and 2008. Clone J (ST381) with blaOXA-23-like rapidly spread and replaced clones A and H in 2009.

conclusionThis study is the first to reveal that the distinct blaOXA-23-like-carrying A. baumannii ST381 displaced the previously prevalent blaOXA-58-like-carrying A. baumannii ST92/ST208, resulting in the rapidly increasing resistance to carbapenems in A. baumannii in Shenzhen People's Hospital in 2009.

Indexed as

Conjugation, GeneticAcinetobacter baumanniiAcinetobacter InfectionsAnti-Bacterial AgentsBacterial Proteinsbeta-Lactamasesbeta-Lactam ResistanceChinaClone CellsGene ExpressionHospitalsHumansImipenemIntensive Care UnitsIsoenzymesMeropenemAnti-Bacterial AgentsBacterial Proteinsbeta-lactamase OXA-23, Acinetobacter baumanniibeta-LactamasescarbapenemaseImipenemIsoenzymesMeropenemThienamycins

Identifiers

PMID26340666
PMCPMC4560421
OpenAlexW1839977204

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.