Evidence map›Paper›PMID 26339419›Full record

ArticleInternational journal of clinical and experimental pathology2015

Association between promoter region genetic variants of PTH SNPs and serum 25(OH)-vitamin D level.

Nasser M Al-Daghri, Omar S Al-Attas, Soundararajan Krishnaswamy, Sobhy M Yakout, Abdul Khader Mohammed, Amal M Alenad, George P Chrousos, Majed S Alokail

Open access · greenAbstract readComparative Study
In one paragraph

Article in International journal of clinical and experimental pathology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 7 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Nasser M Al-DaghriBiomarkers Research Program, Biochemistry Department, College of Science, King Saud University Riyadh, KSA ; Prince Mutaib Chair for Biomarkers of Osteoporosis, King Saud University Riyadh, KSA.
Omar S Al-AttasBiomarkers Research Program, Biochemistry Department, College of Science, King Saud University Riyadh, KSA ; Prince Mutaib Chair for Biomarkers of Osteoporosis, King Saud University Riyadh, KSA.
Soundararajan KrishnaswamyBiomarkers Research Program, Biochemistry Department, College of Science, King Saud University Riyadh, KSA.
Sobhy M YakoutBiomarkers Research Program, Biochemistry Department, College of Science, King Saud University Riyadh, KSA.
Abdul Khader MohammedBiomarkers Research Program, Biochemistry Department, College of Science, King Saud University Riyadh, KSA.
Amal M AlenadSchool of Biological Sciences, University of Southampton Southampton SO17 1BJ, UK.
George P ChrousosFirst Department of Pediatrics, Athens University Medical School Athens, Greece.
Majed S AlokailBiomarkers Research Program, Biochemistry Department, College of Science, King Saud University Riyadh, KSA ; Prince Mutaib Chair for Biomarkers of Osteoporosis, King Saud University Riyadh, KSA.
King Saud University · SAAthens State University · USUniversity of Southampton · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parathyroid hormone (PTH) plays a crucial role in calcium metabolism and skeletal development via altering vitamin D level. Besides, hypersecretion of PTH is implicated in the etiology of osteoporosis. In this study, we analyzed association between promoter region sequence variants of PTH gene and circulating 25-hydroxy-vitamin D (25(OH)D) level. Genotypes of PTH SNPs rs1459015, rs10500783 and rs10500784 and circulating serum 25(OH)D level of healthy adults (N=386) of different nationalities living in Riyadh were determined and relation between the different PTH allelic variants and corresponding mean 25(OH)D values were obtained using Analysis of Variance (ANOVA) and Bonferroni post-hoc test for multiple comparisons. We observed a high prevalence of vitamin D deficiency (<50 nmol/l) among all nationals which ranged from 59% among Indians to 82% among Yemeni. Comparison of the means of 25(OH)D levels corresponding to different genotypes of PTH SNPs indicated that the T allele of SNP rs1459015 was associated with higher 25(OH)D level in the Sudanese (P=0.03), while the T allele of SNP rs10500783 was associated with higher 25(OH)D level in Saudis (P=0.03). Analysis of results also indicated that the Sudanese carriers of the CC genotype of SNP rs1459015 had a higher risk of suffering from vitamin D deficiency (P=0.02). In conclusion, our study indicated significant association between specific PTH gene promoter region variants and altered levels of 25(OH)D and vitamin D deficiency among specific nationals.

Indexed as

Polymorphism, Single NucleotidePromoter Regions, GeneticAdultCross-Sectional StudiesEthnicityFemaleGene FrequencyGenetic Predisposition to DiseaseHumansMaleMiddle AgedParathyroid HormonePhenotypePrevalenceRisk FactorsSaudi Arabia25-hydroxyvitamin DParathyroid HormonePTH protein, humanVitamin D25(OH)DosteoporosisParathyroid hormonesingle nucleotide polymorphismvitamin D

Identifiers

PMID26339419
PMCPMC4555747
OpenAlexW2414299499

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.