Evidence map›Paper›PMID 26338266›Full record

ArticleTransgenic research2015

Strategies to improve low copy transgenic events in Agrobacterium-mediated transformation of maize.

Elumalai Sivamani, Xianggan Li, Samson Nalapalli, Yoshimi Barron, Anna Prairie, David Bradley, Michele Doyle, Qiudeng Que

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In one paragraph

Article in Transgenic research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 3 countries.

Elumalai SivamaniSyngenta Crop Protection, LLC, Research Triangle Park, NC, USA. sivamani.elumalai@syngenta.com.ORCID http://orcid.org/0000-0002-6239-2711
Xianggan LiSyngenta Biotechnology China Co. Ltd, Beijing, People's Republic of China.
Samson NalapalliSyngenta Crop Protection, LLC, Research Triangle Park, NC, USA.
Yoshimi BarronSyngenta Crop Protection, LLC, Research Triangle Park, NC, USA.
Anna PrairieSyngenta Crop Protection, LLC, Research Triangle Park, NC, USA.
David BradleySyngenta Crop Protection, LLC, Research Triangle Park, NC, USA.
Michele DoyleSyngenta Crop Protection, LLC, Research Triangle Park, NC, USA.
Qiudeng QueSyngenta Crop Protection, LLC, Research Triangle Park, NC, USA.
Syngenta (United States) · USSyngenta (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transgenic plants containing low copy transgene insertion free of vector backbone are highly desired for many biotechnological applications. We have investigated two different strategies for increasing the percentage of low copy events in Agrobacterium-mediated transformation experiments in maize. One of the strategies is to use a binary vector with two separate T-DNAs, one T-DNA containing an intact E.coli manA gene encoding phosphomannose isomerase (PMI) as selectable marker gene cassette and another T-DNA containing an RNAi cassette of PMI sequences. By using this strategy, low copy transgenic events containing the transgenes were increased from 43 to 60 % in maize. An alternate strategy is using selectable marker gene cassettes containing regulatory or coding sequences derived from essential plant genes such as 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) or MADS box transcription factor. In this paper we demonstrate that higher percentage of low copy transgenic events can be obtained in Agrobacterium-mediated maize transformation experiments using both strategies. We propose that the above two strategies can be used independently or in combination to increase transgenic events that contain low copy transgene insertion in Agrobacterium-mediated transformation experiments.

Indexed as

Agrobacterium tumefaciensDNA, BacterialDNA Copy Number VariationsGenes, PlantGenetic VectorsPlants, Genetically ModifiedPlasmidsTransformation, GeneticTransgenesZea maysDNA, BacterialT-DNAAgrobacteriumBackbone freeCo-suppressionLow copyMaize transformationRNAiSilencingT-DNATransgenic events

Identifiers

PMID26338266
OpenAlexW1228941785

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.