Evidence map›Paper›PMID 26337663›Full record

ArticleScientific reports2015

Changes in Gene Expression Patterns of Circadian-Clock, Transient Receptor Potential Vanilloid-1 and Nerve Growth Factor in Inflamed Human Esophagus.

Shu-Chuan Yang, Chien-Lin Chen, Chih-Hsun Yi, Tso-Tsai Liu, Kun-Ruey Shieh

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. The physiological role of TRP channels in sleep and circadian rhythm.Journal of cellular and molecular medicine · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Circadian rhythms and pain.Neuroscience and biobehavioral reviews · 2021
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Circadian rhythms: a regulator of gastrointestinal health and dysfunction.Expert review of gastroenterology & hepatology · 2019
    Review
  14. Article
  15. Epithelial acid imbalance in patients with eosinophilic esophagitis.The Journal of allergy and clinical immunology · 2018
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Shu-Chuan YangGeneral Education Center, Tzu Chi College of Technology, Hualien, Taiwan.
Chien-Lin ChenDepartment of Medicine, Buddhist Tzu Chi General Hospital, Hualien, Taiwan.
Chih-Hsun YiDepartment of Medicine, Buddhist Tzu Chi General Hospital, Hualien, Taiwan.
Tso-Tsai LiuDepartment of Medicine, Buddhist Tzu Chi General Hospital, Hualien, Taiwan.
Kun-Ruey ShiehSchool of Medicine, Tzu Chi University, Hualien, Taiwan.
Buddhist Tzu Chi General Hospital · TWTzu Chi University · TWTzu Chi College of Technology · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Circadian rhythm is driven by the molecular circadian-clock system and regulates many physiological functions. Diurnal rhythms in the gastrointestinal tract are known to be related to feeding pattern, but whether these rhythms are also related to the gastrointestinal damage or injuries; for example, gastroesophageal reflux disease (GERD), is unclear. This study was conducted to determine whether expression of circadian-clock genes or factors involved in vagal stimulation or sensitization were altered in the esophagus of GERD patients. Diurnal patterns of PER1, PER2, BMAL1, CRY2, TRPV1, and NGF mRNA expression were found in patient controls, and these patterns were altered and significantly correlated to the GERD severity in GERD patients. Although levels of CRY1, TIM, CB1, NHE3, GDNF, and TAC1 mRNA expression did not show diurnal patterns, they were elevated and also correlated with GERD severity in GERD patients. Finally, strong correlations among PER1, TRPV1, NGF and CRY2 mRNA expression, and among PER2, TRPV1 and CRY2 expression were found. Expression levels of CRY1 mRNA highly correlated with levels of TIM, CB1, NHE3, GDNF and TAC1. This study suggests that the circadian rhythm in the esophagus may be important for the mediation of and/or the response to erosive damage in GERD patients.

Indexed as

Circadian ClocksAdolescentAdultAged, 80 and overCircadian RhythmCircadian Rhythm Signaling Peptides and ProteinsEsophagitis, PepticEsophagusFemaleGene Expression RegulationHumansMaleMiddle AgedNerve Growth FactorTRPV Cation ChannelsYoung AdultCircadian Rhythm Signaling Peptides and ProteinsNerve Growth FactorTRPV1 protein, humanTRPV Cation Channels

Identifiers

PMID26337663
PMCPMC4559770
OpenAlexW2400748407

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.