Evidence map›Paper›PMID 26336105›Full record

ArticleThe Journal of biological chemistry2015

Competing Lipid-Protein and Protein-Protein Interactions Determine Clustering and Gating Patterns in the Potassium Channel from Streptomyces lividans (KcsA).

M Luisa Molina, A Marcela Giudici, José A Poveda, Gregorio Fernández-Ballester, Estefanía Montoya, M Lourdes Renart, Asia M Fernández, José A Encinar, Gloria Riquelme, Andrés Morales and 1 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. An extracellular scaffolding complex confers unusual rectification upon an ionotropic acetylcholine receptor inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Review
  6. NMR studies of lipid regulation of the KBiochimica et biophysica acta. Biomembranes · 2021
    Article
  7. Modulation of Function, Structure and Clustering of KInternational journal of molecular sciences · 2020
    Review
  8. Article
  9. Review
  10. Article
  11. The actions of volatile anesthetics: a new perspective.Acta crystallographica. Section D, Structural biology · 2018
    Review
  12. Article
  13. Article
  14. Inactivation in the potassium channel KcsA.Journal of structural biology: X
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

M Luisa MolinaFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain.
A Marcela GiudiciFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain.
José A PovedaFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain.
Gregorio Fernández-BallesterFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain.
Estefanía MontoyaFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain.
M Lourdes RenartFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain.
Asia M FernándezFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain.
José A EncinarFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain.
Gloria Riquelmethe Instituto de Ciencias Biomédicas, Facultad de Medicina, Universidad de Chile, 1027 Santiago, Chile, and.
Andrés Moralesthe Departamento de Fisiología, Genética y Microbiología, Universidad de Alicante, 03080 Alicante, Spain.
José M González-RosFrom the Instituto de Biología Molecular y Celular, Universidad Miguel Hernández, Elche, 03202 Alicante, Spain, gonzalez.ros@umh.es.
Universitat de Miguel Hernández d'Elx · ESUniversity of Alicante · ESUniversity of Chile · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is increasing evidence to support the notion that membrane proteins, instead of being isolated components floating in a fluid lipid environment, can be assembled into supramolecular complexes that take part in a variety of cooperative cellular functions. The interplay between lipid-protein and protein-protein interactions is expected to be a determinant factor in the assembly and dynamics of such membrane complexes. Here we report on a role of anionic phospholipids in determining the extent of clustering of KcsA, a model potassium channel. Assembly/disassembly of channel clusters occurs, at least partly, as a consequence of competing lipid-protein and protein-protein interactions at nonannular lipid binding sites on the channel surface and brings about profound changes in the gating properties of the channel. Our results suggest that these latter effects of anionic lipids are mediated via the Trp(67)-Glu(71)-Asp(80) inactivation triad within the channel structure and its bearing on the selectivity filter.

Indexed as

Ion Channel GatingBacterial ProteinsLipid BilayersLipidsModels, MolecularPotassium ChannelsProtein BindingProteinsStreptomyces lividansBacterial ProteinsLipid BilayersLipidsPotassium Channelsprokaryotic potassium channelProteinscoupled channel gatinggatingIon channel inactivationlipid-protein interactionmembrane protein clustersmembrane protein nonannular sitesmolecular modelingpotassium channelprotein-protein interactionSupramolecular assembly of ion channels

Identifiers

PMID26336105
PMCPMC4646216
OpenAlexW2196005661

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.