Evidence map›Paper›PMID 26334686›Full record

ArticleBMC biochemistry2015

Purification and characterization of a cytochrome c with novel caspase-3 activation activity from the pathogenic fungus Rhizopus arrhizus.

Manoj Saxena, Rohit Kumar Sharma, Josell Ramirez-Paz, Arthur D Tinoco, Kai Griebenow

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in BMC biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Antifungal Activity of Cedrol fromPlants (Basel, Switzerland) · 2024
    Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Manoj SaxenaDepartment of Environmental Sciences, University of Puerto Rico, Rio Piedras Campus, P.O. Box 70377, San Juan, PR, 00936-837, USA. mks131@gmail.com.
Rohit Kumar SharmaDepartment of Environmental Sciences, University of Puerto Rico, Rio Piedras Campus, P.O. Box 70377, San Juan, PR, 00936-837, USA. investigations7@gmail.com.
Josell Ramirez-PazDepartment of Chemistry, University of Puerto Rico, Rio Piedras Campus, P.O. Box 70377, San Juan, PR, 00936-837, USA. josellyaima@hotmail.com.
Arthur D TinocoDepartment of Chemistry, University of Puerto Rico, Rio Piedras Campus, P.O. Box 70377, San Juan, PR, 00936-837, USA. atinoco9278@gmail.com.
Kai GriebenowDepartment of Chemistry, University of Puerto Rico, Rio Piedras Campus, P.O. Box 70377, San Juan, PR, 00936-837, USA. kai.griebenow@gmail.com.
University of Puerto Rico at Río Piedras · PR

Funding

Development of Peptide-Conjugate Biomimics for Targeted Ti(IV)-Based Anticancer DSC1CA190504 · NCI · UNIVERSITY OF PUERTO RICO RIO PIEDRAS · PI TINOCO, ARTHUR DAVID · 2014 to 2017
$1.4M
NCI NIH HHS 1SC1CA190504-01NCI NIH HHS SC1 CA190504
6 · The paper itself

Abstract

backgroundMembers of Rhizopus species are the most common cause of mucormycosis, a rare but often fatal fungal infection. Host induced pathogen apoptosis and pathogen induced host cell apoptosis are often involved in fungal infections. In many organisms, the release of mitochondrial cytochrome c can trigger apoptosis by activating caspase proteases, but the role of fungal cytochrome c in apoptosis remains unknown.

resultsDNA sequence encoding Rhizopus arrhizus cytochrome c was cloned and expressed in E. coli. Both native and recombinant cytochrome c were purified using ion exchange followed by gel filtration chromatography. The identities of purified proteins were confirmed by MALDI-MS and UV-Visible spectroscopy. For the first time, we demonstrated that Rhizopus arrhizus cytochrome c could activate human capspase-3 in HeLa cell extracts. We also found that Rhizopus arrhizus cytochrome c has redox potential, peroxidase activity, and spectral properties similar to human and horse cytochrome c proteins.

conclusionsRhizopus arrhizus cytochrome c can activate human caspase-3 in HeLa cell extracts and it possesses similar physical and spectral properties as human and horse cytochrome c. This protein was found to have a previously unknown potential to activate human caspase-3, an important step in the apoptosis cascade.

Indexed as

Amino Acid SequenceAnimalsCaspase 3Cytochromes cEnzyme ActivationHeLa CellsHorsesHumansModels, MolecularMolecular Sequence DataProtein ConformationRhizopusCaspase 3Cytochromes c

Identifiers

PMID26334686
PMCPMC4559206
OpenAlexW2167103563

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.