Evidence map›Paper›PMID 26334609›Full record

ArticleAnalytical biochemistry2015

Click chemistry armed enzyme-linked immunosorbent assay to measure palmitoylation by hedgehog acyltransferase.

Thomas Lanyon-Hogg, Naoko Masumoto, George Bodakh, Antonio D Konitsiotis, Emmanuelle Thinon, Ursula R Rodgers, Raymond J Owens, Anthony I Magee, Edward W Tate

Open access · hybridAbstract readValidation Study
In one paragraph

Article in Analytical biochemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
  2. Review
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  6. Review
  7. Article
  8. cat-ELCCA: catalyzing drug discovery through click chemistry.Chemical communications (Cambridge, England) · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Thomas Lanyon-HoggInstitute of Chemical Biology, Department of Chemistry, Imperial College London, South Kensington SW7 2AZ, UK.
Naoko MasumotoInstitute of Chemical Biology, Department of Chemistry, Imperial College London, South Kensington SW7 2AZ, UK.
George BodakhInstitute of Chemical Biology, Department of Chemistry, Imperial College London, South Kensington SW7 2AZ, UK.
Antonio D KonitsiotisMolecular Medicine Section, National Heart & Lung Institute, Imperial College London, South Kensington SW7 2AZ, UK.
Emmanuelle ThinonInstitute of Chemical Biology, Department of Chemistry, Imperial College London, South Kensington SW7 2AZ, UK.
Ursula R RodgersMolecular Medicine Section, National Heart & Lung Institute, Imperial College London, South Kensington SW7 2AZ, UK.
Raymond J OwensDivision of Structural Biology, Henry Wellcome Building for Genomic Medicine, University of Oxford, Roosevelt Drive, Oxford, OX3 7BN, UK; OPPF-UK, The Research Complex at Harwell, Rutherford Appleton Laboratory, Harwell, Oxfordshire, OX11 0FA, UK.
Anthony I MageeMolecular Medicine Section, National Heart & Lung Institute, Imperial College London, South Kensington SW7 2AZ, UK. Electronic address: t.magee@imperial.ac.uk.
Edward W TateInstitute of Chemical Biology, Department of Chemistry, Imperial College London, South Kensington SW7 2AZ, UK. Electronic address: e.tate@imperial.ac.uk.
Imperial College London · GBLung Institute · USRutherford Appleton Laboratory · GB

Funding

Cancer Research UK 16402Cancer Research UK C29637/A10711Cancer Research UK C6433/A16402Medical Research Council MR/K018779/1
6 · The paper itself

Abstract

Hedgehog signaling is critical for correct embryogenesis and tissue development. However, on maturation, signaling is also found to be aberrantly activated in many cancers. Palmitoylation of the secreted signaling protein sonic hedgehog (Shh) by the enzyme hedgehog acyltransferase (Hhat) is required for functional signaling. To quantify this important posttranslational modification, many in vitro Shh palmitoylation assays employ radiolabeled fatty acids, which have limitations in terms of cost and safety. Here we present a click chemistry armed enzyme-linked immunosorbent assay (click-ELISA) for assessment of Hhat activity through acylation of biotinylated Shh peptide with an alkyne-tagged palmitoyl-CoA (coenzyme A) analogue. Click chemistry functionalization of the alkyne tag with azido-FLAG peptide allows analysis through an ELISA protocol and colorimetric readout. This assay format identified the detergent n-dodecyl β-d-maltopyranoside as an improved solubilizing agent for Hhat activity. Quantification of the potency of RU-SKI small molecule Hhat inhibitors by click-ELISA indicated IC50 values in the low- or sub-micromolar range. A stopped assay format was also employed that allows measurement of Hhat kinetic parameters where saturating substrate concentrations exceed the binding capacity of the streptavidin-coated plate. Therefore, click-ELISA represents a nonradioactive method for assessing protein palmitoylation in vitro that is readily expandable to other classes of protein lipidation.

Indexed as

Protein Processing, Post-TranslationalAcyltransferasesBiotinylationClick ChemistryDetergentsEnzyme InhibitorsEnzyme-Linked Immunosorbent AssayFatty Acids, UnsaturatedHedgehog ProteinsHEK293 CellsHumansImmobilized ProteinsLipoylationMaltoseOligopeptidesPalmitoyl Coenzyme AAcyltransferasesDetergentsdodecyl maltopyranosideEnzyme InhibitorsFatty Acids, UnsaturatedHedgehog ProteinsHHAT protein, humanImmobilized ProteinsMaltoseOligopeptidesPalmitoyl Coenzyme APeptide FragmentsRecombinant Fusion ProteinsSHH protein, humanStreptavidinClick chemistryHedgehog acyltransferaseMBOATProtein palmitoylation

Identifiers

PMID26334609
PMCPMC4615133
OpenAlexW1211756061

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.