Evidence map›Paper›PMID 26333666›Full record

ArticleAsian-Australasian journal of animal sciences2015

A Genome-wide Scan for Selective Sweeps in Racing Horses.

Sunjin Moon, Jin Woo Lee, Donghyun Shin, Kwang-Yun Shin, Jun Kim, Ik-Young Choi, Jaemin Kim, Heebal Kim

Open access · goldAbstract read
In one paragraph

Article in Asian-Australasian journal of animal sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Sunjin MoonDepartment of Agricultural Biotechnology and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-742, Korea.
Jin Woo LeeHorse Registry, Korea Racing Authority (KRA), Gwacheon 427-711, Korea.
Donghyun ShinDepartment of Agricultural Biotechnology and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-742, Korea.
Kwang-Yun ShinInstitute for Livestock Promotion, Jeju 690-802, Korea.
Jun KimInstitute for Livestock Promotion, Jeju 690-802, Korea.
Ik-Young ChoiGenome analysis center, National Instrumentation and Environmental Management (NICEM), Seoul National University, Seoul 151-921, Korea.
Jaemin KimInterdisciplinary Program in Bioinformatics, Seoul National University, Seoul 151-742, Korea.
Heebal KimDepartment of Agricultural Biotechnology and Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 151-742, Korea ; Interdisciplinary Program in Bioinformatics, Seoul National University, Seoul 151-742, Korea ; C&K Genomics, Seoul 151-742, Korea.
Seoul National University · KRTaiwan Livestock Research Institute · TWEducation Authority · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Using next-generation sequencing, we conducted a genome-wide scan of selective sweeps associated with selection toward genetic improvement in Thoroughbreds. We investigated potential phenotypic consequence of putative candidate loci by candidate gene association mapping for the finishing time in 240 Thoroughbred horses. We found a significant association with the trait for Ral GApase alpha 2 (RALGAP2) that regulates a variety of cellular processes of signal trafficking. Neighboring genes around RALGAP2 included insulinoma-associated 1 (INSM1), pallid (PLDN), and Ras and Rab interactor 2 (RIN2) genes have similar roles in signal trafficking, suggesting that a co-evolving gene cluster located on the chromosome 22 is under strong artificial selection in racehorses.

Indexed as

Quantitative Trait LociRacehorseSelective SweepSingle Nucleotide Polymorphism

Identifiers

PMID26333666
PMCPMC4647090
OpenAlexW2004859337

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.