Evidence map›Paper›PMID 26333274›Full record

ArticleProtein engineering, design & selection : PEDS2015

A switchable yeast display/secretion system.

James A Van Deventer, Ryan L Kelly, Saravanan Rajan, K Dane Wittrup, Sachdev S Sidhu

Abstract read
In one paragraph

Article in Protein engineering, design & selection : PEDS, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Pharmacophore-driven antibody discovery on the yeast surface.bioRxiv : the preprint server for biology · 2025
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  16. Exploration ofACS synthetic biology · 2022
    Article
  17. Article
  18. Incorporating, Quantifying, and Leveraging Noncanonical Amino Acids in Yeast.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

James A Van DeventerKoch Institute for Integrative Cancer Research Department of Chemical Engineering James.Van_Deventer@tufts.edu sachdev.sidhu@utoronto.ca.
Ryan L KellyKoch Institute for Integrative Cancer Research Department of Biological Engineering, Massachusetts Institute of Technology, 500 Main Street, Building 76 Room 289, Cambridge, MA 02139, USA.
Saravanan RajanDepartment of Molecular Genetics, The Donnelly Centre, University of Toronto, 160 College Street, Toronto, ON, Canada M5S 3E1.
K Dane WittrupKoch Institute for Integrative Cancer Research Department of Chemical Engineering Department of Biological Engineering, Massachusetts Institute of Technology, 500 Main Street, Building 76 Room 289, Cambridge, MA 02139, USA.
Sachdev S SidhuDepartment of Molecular Genetics, The Donnelly Centre, University of Toronto, 160 College Street, Toronto, ON, Canada M5S 3E1 James.Van_Deventer@tufts.edu sachdev.sidhu@utoronto.ca.

Funding

Interdepartmental Biotechnology Training ProgramT32GM008334 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI WITTRUP, KARL DANE · 1989 to 2018
$15.2M
New Approaches to the Selective Targeting of Cancer-associated FibroblastsF32CA168057 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI VAN DEVENTER, JAMES ALLEN · 2012 to 2014
$150k
NCI NIH HHS F32 CA168057NCI NIH HHS F32CA168057NIGMS NIH HHS T32 GM008334NIGMS NIH HHS T32 GM008334-25
6 · The paper itself

Abstract

Display technologies such as yeast and phage display offer powerful alternatives to traditional immunization-based antibody discovery, but require conversion of displayed proteins into soluble form prior to downstream characterization. Here we utilize amber suppression to implement a yeast-based switchable display/secretion system that enables the immediate production of soluble, antibody-like reagents at the end of screening efforts. Model selections in the switchable format remain efficient, and library screening in the switchable format yields renewable sources of affinity reagents exhibiting nanomolar binding affinities. These results confirm that this system provides a seamless link between display-based screening and the production and evaluation of soluble forms of candidate binding proteins. Switchable display/secretion libraries provide a cloning-free, accessible approach to affinity reagent generation.

Indexed as

Cell LineCloning, MolecularHumansModels, MolecularPeptide LibraryProtein ConformationProtein EngineeringSingle-Chain AntibodiesYeastsPeptide LibrarySingle-Chain Antibodiesamber suppressionantibody screeningphage displaysynthetic antibody libraryyeast display

Identifiers

PMID26333274
PMCPMC4596280

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.