Evidence map›Paper›PMID 26330386›Full record

ArticleVeterinary parasitology2015

Variable exon usage of differentially-expressed genes associated with resistance of sheep to Teladorsagia circumcincta.

Hazel Wilkie, Siyang Xu, Anton Gossner, John Hopkins

Open access · hybridAbstract read
In one paragraph

Article in Veterinary parasitology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Trickle infection withFrontiers in immunology · 2022
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Hazel WilkieThe Roslin Institute & R(D)SVS, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, UK.
Siyang XuThe Roslin Institute & R(D)SVS, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, UK.
Anton GossnerThe Roslin Institute & R(D)SVS, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, UK.
John HopkinsThe Roslin Institute & R(D)SVS, University of Edinburgh, Easter Bush, Midlothian EH25 9RG, UK. Electronic address: john.hopkins@ed.ac.uk.
Roslin Institute · GB

Funding

Biotechnology and Biological Sciences Research Council BB/J012653/1Biotechnology and Biological Sciences Research Council BS516875
6 · The paper itself

Abstract

The resistance and susceptibility of sheep to the common abomasal nematode parasite, Teladorsagia circumcincta is strongly associated with the differential polarization of the immune response. Resistant animals control larval colonization by the production of a protective antibody response regulated by Th2 T cells. Susceptible sheep respond to infection by developing an inflammatory Th1/Th17 response that fails to control infection. Previous microarray analysis identified genes associated with T cell polarization that were differentially expressed between the resistant and susceptible sheep. RT-qPCR confirmed the microarray data for ALOX15 and IL13. Both ALOX15 exon 9 and IL13 exon 4 were significantly increased in resistant animals and copy number RT-qPCR showed that expression levels of these exons were significantly negatively correlated with quantitative phenotypic traits, including abomasal worm counts and faecal egg counts. Sequencing of the intronic regions 5' to these genes failed to identify any potential genetic links to differential exon usage.

Indexed as

Trichostrongyloidea5' Untranslated RegionsAnimalsArachidonate 15-LipoxygenaseExonsFemaleGene Expression RegulationGenetic Predisposition to DiseaseInterleukin-13Oligonucleotide Array Sequence AnalysisReverse Transcriptase Polymerase Chain ReactionSheepSheep DiseasesTrichostrongyloidiasis5' Untranslated RegionsArachidonate 15-LipoxygenaseInterleukin-13CytokinesGene variantsResistanceSheepTeladorsagia

Identifiers

PMID26330386
PMCPMC4608359
OpenAlexW1161177104

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.