Evidence map›Paper›PMID 26329827›Full record

ArticleParasites & vectors2015

Development of novel multiplex microsatellite polymerase chain reactions to enable high-throughput population genetic studies of Schistosoma haematobium.

B L Webster, M Rabone, T Pennance, A M Emery, F Allan, A Gouvras, S Knopp, A Garba, A A Hamidou, K A Mohammed and 3 more

Erratum issuedAbstract readEvaluation Study
In one paragraph

Article in Parasites & vectors, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Trial
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Molecular characterization of schistosome cercariae and theirCurrent research in parasitology & vector-borne diseases · 2023
    Article
  9. Article
  10. Population Genetic Structure and Hybridization ofPathogens (Basel, Switzerland) · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Identification of Snails andFrontiers in public health · 2021
    Article
  15. Review
  16. The detection ofCurrent research in parasitology & vector-borne diseases · 2021
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

B L WebsterWolfson Wellcome Biomedical Laboratories, Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK. b.webster@nhm.ac.uk.
M RaboneWolfson Wellcome Biomedical Laboratories, Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK. m.rabone@nhm.ac.uk.
T PennanceWolfson Wellcome Biomedical Laboratories, Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK. t.pennance@nhm.ac.uk.
A M EmeryWolfson Wellcome Biomedical Laboratories, Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK. a.emery@nhm.ac.uk.
F AllanWolfson Wellcome Biomedical Laboratories, Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK. f.allan@nhm.ac.uk.
A GouvrasWolfson Wellcome Biomedical Laboratories, Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK. a.gouvras@nhm.ac.uk.
S KnoppWolfson Wellcome Biomedical Laboratories, Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK. s.knopp@unibas.ch.
A GarbaRéseau International Schistosomoses, Environnement, Aménagement et Lutte (RISEAL-Niger), 333, Avenue des Zarmakoye, B.P. 13724, Niamey, Niger. s.knopp@unibas.ch.
A A HamidouRéseau International Schistosomoses, Environnement, Aménagement et Lutte (RISEAL-Niger), 333, Avenue des Zarmakoye, B.P. 13724, Niamey, Niger. amina@risealniger.org.
K A MohammedPublic Health Laboratory - Ivo de Carneri (PHL-IdC), P.O.BOX 122, Wawi, Chake Chake, Pemba, United Republic of Tanzania. kamsharjyy2@yahoo.com.
S M AmePublic Health Laboratory - Ivo de Carneri (PHL-IdC), P.O.BOX 122, Wawi, Chake Chake, Pemba, United Republic of Tanzania. shaaliame@yahoo.com.
D RollinsonWolfson Wellcome Biomedical Laboratories, Department of Life Sciences, Natural History Museum, Cromwell Road, London, SW7 5BD, UK. d.rollinson@nhm.ac.uk.
J P WebsterDepartment of Infectious Disease Epidemiology, Imperial College Faculty of Medicine (St Mary's Campus), Norfolk Place, London, W2 1PG, UK. jowebster@rvc.ac.uk.

Funding

Wellcome Trust 104958/Z/14/Z
6 · The paper itself

Abstract

backgroundHuman urogenital schistosomiasis caused by Schistosoma haematobium is widely distributed across Africa and is increasingly targeted for control and regional elimination. The development of new high-throughput, cost-effective molecular tools and approaches are needed to monitor and evaluate the impact of control programs on the parasite populations. Microsatellite loci are genetic markers that can be used to investigate how parasite populations change over time and in relation to external influences such as control interventions.

findingsHere, 18 existing S. haematobium microsatellite loci were optimised to enable simultaneous amplification across two novel multiplex microsatellite PCR's, each containing nine loci. Methods were developed for the cost effective and rapid processing and microsatellite analysis of S. haematobium larval stages stored on Whatman-FTA cards and proved robust on miracidia and cercariae collected from Zanzibar and Niger.

conclusionThe development of these novel and robust multiplex microsatellite assays, in combination with an improved protocol to elute gDNA from Whatman-FTA fixed schistosome larval stages, enables the high-throughput population genetic analysis of S. haematobium. The molecular resources and protocols described here advance the way researchers can perform multi locus-based population genetic analyses of S. haematobium as part of the evaluation and monitoring of schistosomiasis control programmes.

Indexed as

Genetic VariationMicrosatellite RepeatsAnimalsCost-Benefit AnalysisGenetics, PopulationHumansLarvaMultiplex Polymerase Chain ReactionNigerSchistosoma haematobiumSchistosomiasis haematobiaTanzaniaTime FactorsUrinary Tract Infections

Identifiers

PMID26329827
PMCPMC4557312

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.