Evidence map›Paper›PMID 26328251›Full record

ArticleAmerican journal of cancer research2015

Monosomy of chromosome 17 in breast cancer during interpretation of HER2 gene amplification.

Matteo Brunelli, Alessia Nottegar, Giuseppe Bogina, Anna Caliò, Luca Cima, Albino Eccher, Caterina Vicentini, Lisa Marcolini, Aldo Scarpa, Serena Pedron and 20 more

Open access · greenAbstract read
In one paragraph

Article in American journal of cancer research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 9 institutions in 6 countries.

Matteo BrunelliDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Alessia NottegarDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Giuseppe BoginaAnatomic Pathology, Sacro Cuore Don Calabria Hospital Negrar, Italy.
Anna CaliòDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Luca CimaDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Albino EccherDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Caterina VicentiniARC-NET Applied Research Centre, University of Verona Italy.
Lisa MarcoliniDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Aldo ScarpaDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy ; ARC-NET Applied Research Centre, University of Verona Italy.
Serena PedronDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Eleonora BrunelloDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Sakari KnuutilaDepartment of Pathology, Laboratory of Molecular Cytogenetic, University of Helsinki Finland.
Anna SapinoDepartment of Medical Sciences, Anatomic Pathology, University and Hospital Trust Turin, Italy.
Caterina MarchiòDepartment of Medical Sciences, Anatomic Pathology, University and Hospital Trust Turin, Italy.
Emilio BriaMedical Oncology, University and Hospital Trust Verona, Italy.
Annamaria MolinoMedical Oncology, University and Hospital Trust Verona, Italy.
Luisa CarbogninMedical Oncology, University and Hospital Trust Verona, Italy.
Giampaolo TortoraMedical Oncology, University and Hospital Trust Verona, Italy.
Bharat JasaniInstitute of Cancer & Genetics, Pathology, Cardiff University United Kingdom.
Keith MillerUK NEQAS, University College of London United Kingdom.
Ibrahim MerdolUK NEQAS, University College of London United Kingdom.
Lucia ZanattaAnatomic Pathology, S. Maria di Ca' Foncello Hospital Treviso, Italy.
Licia LaurinoAnatomic Pathology, S. Maria di Ca' Foncello Hospital Treviso, Italy.
Tiina WirtanenDepartment of Pathology, Laboratory of Molecular Cytogenetic, University of Helsinki Finland ; Department of Pathology, HUSLab, University Central Hospital Helsinki, Finland.
Giuseppe ZamboniDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy ; Anatomic Pathology, Sacro Cuore Don Calabria Hospital Negrar, Italy.
Marcella MarconiAnatomic Pathology, Sacro Cuore Don Calabria Hospital Negrar, Italy.
Marco ChilosiDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Erminia ManfrinDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Guido MartignoniDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
Franco BonettiDepartment of Pathology and Diagnostic, Anatomic Pathology, University and Hospital Trust Verona, Italy.
University Hospital Foundation · CAUniversity of Verona · ITOspedale Sacro Cuore Don Calabria · ITCa' Foncello Hospital · ITDepartment of Medical Sciences · BYSOAS University of London · GBCancer Genetics (United States) · USHelsinki University Hospital · FIInstitute for Molecular Medicine Finland · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Monosomy of chromosome 17 may affect the assessment of HER2 amplification. Notably, the prevalence ranges from 1% up to 49% due to lack of consensus in recognition. We sought to investigate the impact of monosomy of chromosome 17 to interpretation of HER2 gene status. 201 breast carcinoma were reviewed for HER2 gene amplification and chromosome 17 status. FISH analysis was performed by using double probes (LSI/CEP). Absolute gene copy number was also scored per each probe. HER2 FISH test was repeated on serial tissue sections, ranging in thickness from 3 to 20 µm. Ratio was scored and subsequently corrected by monosomy after gold control test using the aCGH method to overcome false interpretation due to artefactual nuclear truncation. HER2 immunotests was performed on all cases. 26/201 cases were amplified (13%). Single signals per CEP17 were revealed in 7/201 (3.5%) cases. Five out of 7 cases appeared monosomic with aCGH (overall, 5/201, 2.5%) and evidenced single signals in >60% of nuclei after second-look on FISH when matching both techniques. Among 5, one case showed amplification with a pattern 7/1 (HER2/CEP17>2) of copies (3+ at immunotest); three cases revealed single signals per both probes (LSI/CEP=1) and one case revealed a 3:1 ratio; all last 4 cases showed 0/1+ immunoscore. We concluded that: 1) monosomy of chromosome 17 may be observed in 2.5% of breast carcinoma; 2) monosomy of chromosome 17 due to biological reasons rather than nuclear truncation was observed when using the cut-off of 60% of nuclei harboring single signals; 3) the skewing of the ratio due to single centromeric 17 probe may lead to false positive evaluation; 4) breast carcinomas showing a 3:1 ratio (HER2/CEP17) usually show negative 0/1+ immunoscore and <6 gene copy number at FISH.

Indexed as

aCGH methodBreast carcinomachromosome 17double probesfalse positiveFISH analysisHER 2 amplificationmonosomyratio (HER2/CEP 17)single signals

Identifiers

PMID26328251
PMCPMC4548332
OpenAlexW2402712478

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.