Evidence map›Paper›PMID 26328044›Full record

ArticleGastroenterology and hepatology from bed to bench2015

Protein-Protein Interaction Network could reveal the relationship between the breast and colon cancer.

Mona Zamanian-Azodi, Mostafa Rezaei-Tavirani, Sara Rahmati-Rad, Hadi Hasanzadeh, Majid Rezaei Tavirani, Samaneh Sadat Seyyedi

Open access · greenAbstract read
In one paragraph

Article in Gastroenterology and hepatology from bed to bench, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
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  3. Network analysis of liver cancer: a system biology approach.Gastroenterology and hepatology from bed to bench · 2023
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  8. Personalized medicine in colorectal cancer.Gastroenterology and hepatology from bed to bench · 2020
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  9. Gene screening of colorectal cancers via network analysis.Gastroenterology and hepatology from bed to bench · 2019
    Article
  10. Pharmaceutical Advances and Proteomics Researches.Iranian journal of pharmaceutical research : IJPR · 2019
    Review
  11. Review
  12. Highlighted role of VEGFA in follow up of celiac disease.Gastroenterology and hepatology from bed to bench · 2019
    Article
  13. Article
  14. Metabolic analysis of acute appendicitis by using system biology approach.Gastroenterology and hepatology from bed to bench · 2018
    Article
  15. Article
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  17. Biochemical pathway analysis of gastric atrophy.Gastroenterology and hepatology from bed to bench · 2018
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  18. Article
  19. Network analysis of grade II into grade III transition in rectum cancer patients.Gastroenterology and hepatology from bed to bench · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Mona Zamanian-AzodiProteomics Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Mostafa Rezaei-TaviraniProteomics Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Sara Rahmati-RadDepartment of Cell and Molecular Biology, Faculty of Science, University of Tehran, Tehran, Iran.
Hadi HasanzadehCancer Research Center, Department of Medical Physics, Semnan University of Medical Science, Semnan, Iran.
Majid Rezaei TaviraniFaculty of Medicine, Ilam University of Medical Sciences, Ilam, Iran.
Samaneh Sadat SeyyediDepartment of Medical Genetics, Tehran University of Medical Sciences, International Campus (TUMS- IC), Tehran, Iran.
Shahid Beheshti University of Medical Sciences · IRMedical University of Ilam · IRUniversity of Tehran · IR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimThis study is aimed to elicit the possible correlation between breast and colon cancer from molecular prospective by analyzing and comparing pathway-based biomarkers.

backgroundBreast and colon cancer are known to be frequent causes of morbidity and mortality in men and women around the world. There is some evidence that while the incident of breast cancer in young women is high, it is reported lower in the aged women. In fact, aged women are more prone to colorectal cancer than older men. . In addition, many studies showed that several biomarkers are common among these malignancies. PATIENTS AND

methodsThe genes were retrieved and compared from KEGG database and WikiPathway, and subsequently, protein-protein interaction (PPI) network was constructed and analyzed using Cytoscape v:3.2.1 software and related algorithms.

resultsMore than forty common genes were identified among these malignancies; however, by pathways comparison, twenty genes are related to both breast and colon cancer. Centrality and cluster screening identified hub genes, including SMAD2, SMAD3, (SMAD4, MYC), JUN, BAD, TP53. These seven genes are enriched in regulation of transforming growth factor beta receptor signaling pathway, positive regulation of Rac protein signal transduction, positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway, and positive regulation of mitotic metaphase/anaphase transition respectively.

conclusionAs there are numerous genes frequent between colorectal cancer and breast cancer, there may be a common molecular origin for these malignancies occurrences. It seems that breast cancer in females interferes with the rate of colorectal cancer incidence.

Identifiers

PMID26328044
PMCPMC4553162
OpenAlexW1871670568

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.