Evidence map›Paper›PMID 26327585›Full record

ArticleRNA biology2015

Elaborate uORF/IRES features control expression and localization of human glycyl-tRNA synthetase.

Jana Alexandrova, Caroline Paulus, Joëlle Rudinger-Thirion, Fabrice Jossinet, Magali Frugier

Open access · bronzeAbstract read
In one paragraph

Article in RNA biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Plexin-Semaphorin Signaling Modifies Neuromuscular Defects in aFrontiers in molecular neuroscience · 2018
    Article
  14. HIV-1 Pr55RNA biology · 2017
    Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jana Alexandrovaa Architecture et Réactivité de l'ARN, Université de Strasbourg, CNRS ; IBMC ; 15 rue René Descartes; Strasbourg Cedex , France.
Caroline Paulusa Architecture et Réactivité de l'ARN, Université de Strasbourg, CNRS ; IBMC ; 15 rue René Descartes; Strasbourg Cedex , France.
Joëlle Rudinger-Thiriona Architecture et Réactivité de l'ARN, Université de Strasbourg, CNRS ; IBMC ; 15 rue René Descartes; Strasbourg Cedex , France.
Fabrice Jossineta Architecture et Réactivité de l'ARN, Université de Strasbourg, CNRS ; IBMC ; 15 rue René Descartes; Strasbourg Cedex , France.
Magali Frugiera Architecture et Réactivité de l'ARN, Université de Strasbourg, CNRS ; IBMC ; 15 rue René Descartes; Strasbourg Cedex , France.
Architecture et Réactivité de l'arN · FRDescartes (Belgium) · BEUniversité de Strasbourg · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The canonical activity of glycyl-tRNA synthetase (GARS) is to charge glycine onto its cognate tRNAs. However, outside translation, GARS also participates in many other functions. A single gene encodes both the cytosolic and mitochondrial forms of GARS but 2 mRNA isoforms were identified. Using immunolocalization assays, in vitro translation assays and bicistronic constructs we provide experimental evidence that one of these mRNAs tightly controls expression and localization of human GARS. An intricate regulatory domain was found in its 5'-UTR which displays a functional Internal Ribosome Entry Site and an upstream Open Reading Frame. Together, these elements hinder the synthesis of the mitochondrial GARS and target the translation of the cytosolic enzyme to ER-bound ribosomes. This finding reveals a complex picture of GARS translation and localization in mammals. In this context, we discuss how human GARS expression could influence its moonlighting activities and its involvement in diseases.

Indexed as

Gene Expression Regulation, EnzymologicAnimalsBase SequenceChlorocebus aethiopsCodon, TerminatorCOS CellsEndoplasmic ReticulumGlycine-tRNA LigaseHumansInternal Ribosome Entry SitesIsoenzymesModels, BiologicalMolecular Sequence DataOpen Reading FramesPeptide Chain Initiation, TranslationalProtein TransportCodon, TerminatorGlycine-tRNA LigaseInternal Ribosome Entry SitesIsoenzymesRNA CapsRNA, Messengeraminoacyl-tRNA synthetaseIRESpost-transcriptional controluORF

Identifiers

PMID26327585
PMCPMC4829322
OpenAlexW1219892868

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.