Evidence map›Paper›PMID 26325264›Full record

ArticleJournal of biomedical optics2015

Accounting for filter bandwidth improves the quantitative accuracy of bioluminescence tomography.

Shelley L Taylor, Suzannah K G Mason, Sophie L Glinton, Mark Cobbold, Hamid Dehghani

Abstract read
In one paragraph

Article in Journal of biomedical optics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Shelley L TaylorUniversity of Birmingham, PSIBS Doctoral Training Centre, Edgbaston, Birmingham B15 2TT, United KingdombUniversity of Birmingham, School of Computer Science, Edgbaston, Birmingham B15 2TT, United Kingdom.
Suzannah K G MasonUniversity of Birmingham, PSIBS Doctoral Training Centre, Edgbaston, Birmingham B15 2TT, United KingdombUniversity of Birmingham, School of Computer Science, Edgbaston, Birmingham B15 2TT, United Kingdom.
Sophie L GlintonUniversity of Birmingham, PSIBS Doctoral Training Centre, Edgbaston, Birmingham B15 2TT, United KingdombUniversity of Birmingham, School of Computer Science, Edgbaston, Birmingham B15 2TT, United Kingdom.
Mark CobboldUniversity of Birmingham, College of Medical and Dental Sciences, School of Immunity and Infection, Edgbaston, Birmingham B15 2TT, United Kingdom.
Hamid DehghaniUniversity of Birmingham, PSIBS Doctoral Training Centre, Edgbaston, Birmingham B15 2TT, United KingdombUniversity of Birmingham, School of Computer Science, Edgbaston, Birmingham B15 2TT, United Kingdom.

Funding

NIRFASTR01CA132750 · NCI · DARTMOUTH COLLEGE · PI POGUE, BRIAN WILLIAM · 2009 to 2012
$1.2M
NCI NIH HHS R01 CA132750NCI NIH HHS R01CA132750
6 · The paper itself

Abstract

Bioluminescence imaging is a noninvasive technique whereby surface weighted images of luminescent probes within animals are used to characterize cell count and function. Traditionally, data are collected over the entire emission spectrum of the source using no filters and are used to evaluate cell count/function over the entire spectrum. Alternatively, multispectral data over several wavelengths can be incorporated to perform tomographic reconstruction of source location and intensity. However, bandpass filters used for multispectral data acquisition have a specific bandwidth, which is ignored in the reconstruction. In this work, ignoring the bandwidth is shown to introduce a dependence of the recovered source intensity on the bandwidth of the filters. A method of accounting for the bandwidth of filters used during multispectral data acquisition is presented and its efficacy in increasing the quantitative accuracy of bioluminescence tomography is demonstrated through simulation and experiment. It is demonstrated that while using filters with a large bandwidth can dramatically decrease the data acquisition time, if not accounted for, errors of up to 200% in quantitative accuracy are introduced in two-dimensional planar imaging, even after normalization. For tomographic imaging, the use of this method to account for filter bandwidth dramatically improves the quantitative accuracy.

Indexed as

AlgorithmsAnimalsComputer SimulationImage Processing, Computer-AssistedMiceTomography, Optical

Identifiers

PMID26325264
PMCPMC5996822

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.