Evidence map›Paper›PMID 26323588›Full record

ArticleScientific reports2015

PI4K-beta and MKNK1 are regulators of hepatitis C virus IRES-dependent translation.

Joachim Lupberger, Claudia Casanova, Benoit Fischer, Amelie Weiss, Isabel Fofana, Nelly Fontaine, Toshinobu Fujiwara, Mickael Renaud, Arnaud Kopp, Catherine Schuster and 3 more

Abstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
  2. Review
  3. Hepatitis C Virus Translation Regulation.International journal of molecular sciences · 2020
    Review
  4. Review
  5. Article
  6. Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Joachim LupbergerInserm U1110, Institut de Recherche sur les Maladies Virales et Hépatiques Strasbourg, France.
Claudia CasanovaDepartment of Medicine II, University of Freiburg, Freiburg, Germany.
Benoit FischerHigh Throughput Screening platform, IGBMC, UMR7104 CNRS UdS, Inserm, U964, Illkirch, France.
Amelie WeissHigh Throughput Screening platform, IGBMC, UMR7104 CNRS UdS, Inserm, U964, Illkirch, France.
Isabel FofanaInserm U1110, Institut de Recherche sur les Maladies Virales et Hépatiques Strasbourg, France.
Nelly FontaineInserm U1110, Institut de Recherche sur les Maladies Virales et Hépatiques Strasbourg, France.
Toshinobu FujiwaraLaboratory of Hygienic Chemistry, Graduate School of Pharmaceutical Sciences, Nagoya City University, Nagoya, Japan.
Mickael RenaudHigh Throughput Screening platform, IGBMC, UMR7104 CNRS UdS, Inserm, U964, Illkirch, France.
Arnaud KoppHigh Throughput Screening platform, IGBMC, UMR7104 CNRS UdS, Inserm, U964, Illkirch, France.
Catherine SchusterInserm U1110, Institut de Recherche sur les Maladies Virales et Hépatiques Strasbourg, France.
Laurent BrinoHigh Throughput Screening platform, IGBMC, UMR7104 CNRS UdS, Inserm, U964, Illkirch, France.
Thomas F BaumertInserm U1110, Institut de Recherche sur les Maladies Virales et Hépatiques Strasbourg, France.
Christian ThomaDepartment of Medicine II, University of Freiburg, Freiburg, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cellular translation is down-regulated by host antiviral responses. Picornaviridae and Flaviviridae including hepatitis C virus (HCV) evade this process using internal ribosomal entry sequences (IRESs). Although HCV IRES translation is a prerequisite for HCV replication, only few host factors critical for IRES activity are known and the global regulator network remains largely unknown. Since signal transduction is an import regulator of viral infections and the host antiviral response we combined a functional RNAi screen targeting the human signaling network with a HCV IRES-specific reporter mRNA assay. We demonstrate that the HCV host cell cofactors PI4K and MKNK1 are positive regulators of HCV IRES translation representing a novel pathway with a functional relevance for the HCV life cycle and IRES-mediated translation of viral RNA.

Indexed as

Cell LineCell SurvivalGenes, ReporterHepacivirusHumansInternal Ribosome Entry SitesIntracellular Signaling Peptides and ProteinsMinor Histocompatibility AntigensPhosphotransferases (Alcohol Group Acceptor)Protein Serine-Threonine KinasesRNA InterferenceRNA, MessengerRNA, Small InterferingRNA, ViralInternal Ribosome Entry SitesIntracellular Signaling Peptides and ProteinsMinor Histocompatibility AntigensMKNK1 protein, humanphosphatidylinositol phosphate 4-kinasePhosphotransferases (Alcohol Group Acceptor)Protein Serine-Threonine KinasesRNA, MessengerRNA, Small InterferingRNA, Viral

Identifiers

PMID26323588
PMCPMC4555030

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.