Evidence map›Paper›PMID 26323038›Full record

ArticleNature structural & molecular biology2015

Histone monoubiquitination by Clock-Bmal1 complex marks Per1 and Per2 genes for circadian feedback.

Alfred G Tamayo, Hao A Duong, Maria S Robles, Matthias Mann, Charles J Weitz

Abstract read
In one paragraph

Article in Nature structural & molecular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 61 citations in OpenAlex.

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  10. An integrated structural model of the DNA damage-responsive H3K4me3 binding WDR76:SPIN1 complex with the nucleosome.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  18. Uncovering the Complexities of Salt Sensitivity.Function (Oxford, England) · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Alfred G TamayoDepartment of Neurobiology, Harvard Medical School, Boston, Massachusetts, USA.
Hao A DuongDepartment of Neurobiology, Harvard Medical School, Boston, Massachusetts, USA.
Maria S RoblesDepartment of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany.
Matthias MannDepartment of Proteomics and Signal Transduction, Max-Planck Institute of Biochemistry, Martinsried, Germany.
Charles J WeitzDepartment of Neurobiology, Harvard Medical School, Boston, Massachusetts, USA.
Harvard University · USMax Planck Institute of Biochemistry · DE

Funding

FUNDAMENTAL NEUROBIOLOGYT32NS007484 · NINDS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI REGEHR, WADE G · 2000 to 2014
$5.9M
BMAL1 Complexes of the Circadian ClockR01GM095945 · NIGMS · HARVARD MEDICAL SCHOOL · PI WEITZ, CHARLES J · 2011 to 2014
$1.6M
NIGMS NIH HHS R01 GM095945
6 · The paper itself

Abstract

Circadian rhythms in mammals are driven by a feedback loop in which the transcription factor Clock-Bmal1 activates expression of Per and Cry proteins, which together form a large nuclear complex (Per complex) that represses Clock-Bmal1 activity. We found that mouse Clock-Bmal1 recruits the Ddb1-Cullin-4 ubiquitin ligase to Per (Per1 and Per2), Cry (Cry1 and Cry2) and other circadian target genes. Histone H2B monoubiquitination at Per genes was rhythmic and depended on Bmal1, Ddb1 and Cullin-4a. Depletion of Ddb1-Cullin-4a or an independent decrease in H2B monoubiquitination caused defective circadian feedback and decreased the association of the Per complex with DNA-bound Clock-Bmal1. Clock-Bmal1 thus covalently marks Per genes for subsequent recruitment of the Per complex. Our results reveal a chromatin-mediated signal from the positive to the negative limb of the clock that provides a licensing mechanism for circadian feedback.

Indexed as

AnimalsARNTL Transcription FactorsChromatin ImmunoprecipitationChromatography, LiquidCircadian RhythmCLOCK ProteinsCullin ProteinsDNA-Binding ProteinsDNA PrimersFeedback, PhysiologicalHistonesImmunoblottingMiceMice, Inbred C57BLMultiprotein ComplexesOligopeptidesARNTL Transcription FactorsBmal1 protein, mouseClock protein, mouseCLOCK ProteinsCul4a protein, mouseCullin ProteinsDdb1 protein, mouseDNA-Binding ProteinsDNA PrimersHistonesMultiprotein ComplexesOligopeptidesPer1 protein, mousePer2 protein, mousePeriod Circadian Proteins

Identifiers

PMID26323038
PMCPMC4600324
OpenAlexW1259627718

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.