Evidence map›Paper›PMID 26320862›Full record

ArticleChemistry & biology2015

Inflammatory Signaling by NOD-RIPK2 Is Inhibited by Clinically Relevant Type II Kinase Inhibitors.

Peter Canning, Qui Ruan, Tobias Schwerd, Matous Hrdinka, Jenny L Maki, Danish Saleh, Chalada Suebsuwong, Soumya Ray, Paul E Brennan, Gregory D Cuny and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Chemistry & biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed, 123 citations in OpenAlex.

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  16. Article
  17. scDual-Seq ofFrontiers in immunology · 2023
    Article
  18. RIPK2: a promising target for cancer treatment.Frontiers in pharmacology · 2023
    Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Peter CanningStructural Genomics Consortium, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford OX3 7DQ, UK.
Qui RuanDepartment of Developmental, Molecular & Chemical Biology, Tufts University School of Medicine, 136 Harrison Avenue, Boston, MA 02111, USA.
Tobias SchwerdTranslational Gastroenterology Unit, Nuffield Department of Medicine and Department of Pediatrics, John Radcliffe Hospital, University of Oxford, Oxford OX3 9DU, UK.
Matous HrdinkaLudwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7DQ, UK.
Jenny L MakiDepartment of Developmental, Molecular & Chemical Biology, Tufts University School of Medicine, 136 Harrison Avenue, Boston, MA 02111, USA.
Danish SalehMedical Scientist Training Program and Program in Neuroscience, Sackler School of Graduate Biomedical Sciences, Tufts University School of Medicine, Boston, MA 02111, USA.
Chalada SuebsuwongDepartment of Chemistry, University of Houston, Houston, TX 77204, USA.
Soumya RayCenter for Neurologic Diseases, Department of Neurology, Brigham & Women's Hospital and Harvard Medical School, Cambridge, MA 02139, USA.
Paul E BrennanStructural Genomics Consortium, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford OX3 7DQ, UK; Target Discovery Institute, University of Oxford, NDM Research Building, Roosevelt Drive, Oxford OX3 7LD, UK.
Gregory D CunyDepartment of Pharmacological and Pharmaceutical Sciences, University of Houston, Houston, TX 77204, USA.
Holm H UhligTranslational Gastroenterology Unit, Nuffield Department of Medicine and Department of Pediatrics, John Radcliffe Hospital, University of Oxford, Oxford OX3 9DU, UK.
Mads Gyrd-HansenLudwig Institute for Cancer Research, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7DQ, UK.
Alexei DegterevDepartment of Developmental, Molecular & Chemical Biology, Tufts University School of Medicine, 136 Harrison Avenue, Boston, MA 02111, USA. Electronic address: alexei.degterev@tufts.edu.
Alex N BullockStructural Genomics Consortium, University of Oxford, Old Road Campus, Roosevelt Drive, Oxford OX3 7DQ, UK. Electronic address: alex.bullock@sgc.ox.ac.uk.
Tufts University · USGenomics (United Kingdom) · GBJohn Radcliffe Hospital · GBLudwig Cancer Research · GBUniversity of Houston · USBrigham and Women's Hospital · US

Funding

Molecular and functional analysis of necroptosis initiation complexR01GM080356 · NIGMS · TUFTS UNIVERSITY BOSTON · PI DEGTEREV, ALEXEI · 2008 to 2012
$1.9M
Mechanistic analysis of necrostatins: specific inhibitors of programmed necrosisR01GM084205 · NIGMS · TUFTS UNIVERSITY BOSTON · PI DEGTEREV, ALEXEI · 2009 to 2012
$1.8M
NIGMS NIH HHS R01 GM080356NIGMS NIH HHS R01GM080356NIGMS NIH HHS R01 GM084205NIGMS NIH HHS R01GM084205Wellcome Trust 092809/Z/10/ZWellcome Trust 102894Wellcome Trust 102894/Z/13/ZWellcome Trust 106169
6 · The paper itself

Abstract

RIPK2 mediates pro-inflammatory signaling from the bacterial sensors NOD1 and NOD2, and is an emerging therapeutic target in autoimmune and inflammatory diseases. We observed that cellular RIPK2 can be potently inhibited by type II inhibitors that displace the kinase activation segment, whereas ATP-competitive type I inhibition was only poorly effective. The most potent RIPK2 inhibitors were the US Food and Drug Administration-approved drugs ponatinib and regorafenib. Their mechanism of action was independent of NOD2 interaction and involved loss of downstream kinase activation as evidenced by lack of RIPK2 autophosphorylation. Notably, these molecules also blocked RIPK2 ubiquitination and, consequently, inflammatory nuclear factor κB signaling. In monocytes, the inhibitors selectively blocked NOD-dependent tumor necrosis factor production without affecting lipopolysaccharide-dependent pathways. We also determined the first crystal structure of RIPK2 bound to ponatinib, and identified an allosteric site for inhibitor development. These results highlight the potential for type II inhibitors to treat indications of RIPK2 activation as well as inflammation-associated cancers.

Indexed as

Amino Acid SequenceAnimalsCells, CulturedHumansImidazolesInflammationModels, MolecularMolecular Sequence DataNod1 Signaling Adaptor ProteinNod2 Signaling Adaptor ProteinProtein BindingProtein Kinase InhibitorsPyridazinesReceptor-Interacting Protein Serine-Threonine Kinase 2Sf9 CellsSignal TransductionImidazolesNOD1 protein, humanNod1 Signaling Adaptor ProteinNOD2 protein, humanNod2 Signaling Adaptor ProteinponatinibProtein Kinase InhibitorsPyridazinesReceptor-Interacting Protein Serine-Threonine Kinase 2RIPK2 protein, human

Identifiers

PMID26320862
PMCPMC4579271
OpenAlexW2118048714

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.