Evidence map›Paper›PMID 26320580›Full record

ArticleStructure (London, England : 1993)2015

Crystal Structures of the Extracellular Domain from PepT1 and PepT2 Provide Novel Insights into Mammalian Peptide Transport.

John H Beale, Joanne L Parker, Firdaus Samsudin, Anne L Barrett, Anish Senan, Louise E Bird, David Scott, Raymond J Owens, Mark S P Sansom, Stephen J Tucker and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 56 citations in OpenAlex.

  1. Review
  2. Conformational Landscape of the Di- and Tripeptide Permease A Transport Cycle.Journal of chemical information and modeling · 2025
    Article
  3. First crystal structure of the DUF2436 domain of virulence proteins from Porphyromonas gingivalis.Acta crystallographica. Section F, Structural biology communications · 2024
    Article
  4. Article
  5. Article
  6. Structure of the human heparan-α-glucosaminidebioRxiv : the preprint server for biology · 2024
    Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. The Structure and Mechanism of Drug Transporters.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  13. Membrane Chemistry Tunes the Structure of a Peptide Transporter.Angewandte Chemie (International ed. in English) · 2020
    Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Review
  20. Di- and tripeptide transport in vertebrates: the contribution of teleost fish models.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2017
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

John H BealeDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Joanne L ParkerDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Firdaus SamsudinDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Anne L BarrettDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK; Clarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK.
Anish SenanDepartment of Biological Sciences, Oxford Brookes University, Oxford OX3 0BP, UK.
Louise E BirdDepartment of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Oxford OX3 0BP, UK; OPPF-UK, Research Complex at Harwell, Harwell Oxford, Didcot, Oxfordshire OX11 0FA, UK.
David ScottResearch Complex at Harwell, Harwell Science and Innovation Campus, Didcot, Oxfordshire OX11 0FA, UK; ISIS Spallation Neutron and Muon Source, Rutherford Appleton Laboratory, Oxfordshire OX11 0FA, UK; School of Biosciences, School of Biosciences, Sutton Bonington Campus, Leicestershire LE12 5RD, UK.
Raymond J OwensDepartment of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Oxford OX3 0BP, UK; OPPF-UK, Research Complex at Harwell, Harwell Oxford, Didcot, Oxfordshire OX11 0FA, UK.
Mark S P SansomDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK; OXION Initiative in Ion Channels and Membrane Transport, University of Oxford OX1 3PU, UK.
Stephen J TuckerClarendon Laboratory, Department of Physics, University of Oxford, Oxford OX1 3PU, UK; OXION Initiative in Ion Channels and Membrane Transport, University of Oxford OX1 3PU, UK.
David MeredithDepartment of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Oxford OX3 0BP, UK.
Philip W FowlerDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.
Simon NewsteadDepartment of Biochemistry, University of Oxford, Oxford OX1 3QU, UK; OXION Initiative in Ion Channels and Membrane Transport, University of Oxford OX1 3PU, UK. Electronic address: simon.newstead@bioch.ox.ac.uk.
University of Oxford · GBOxford Brookes University · GBOxfam · GBResearch Complex at Harwell · GBRutherford Appleton Laboratory · GB

Funding

Medical Research Council G0900399Medical Research Council MR/K018779/1Wellcome Trust 084655Wellcome Trust 102890Wellcome Trust 102890/Z/13/Z
6 · The paper itself

Abstract

Mammals obtain nitrogen via the uptake of di- and tri-peptides in the gastrointestinal tract through the action of PepT1 and PepT2, which are members of the POT family of proton-coupled oligopeptide transporters. PepT1 and PepT2 also play an important role in drug transport in the human body. Recent crystal structures of bacterial homologs revealed a conserved peptide-binding site and mechanism of transport. However, a key structural difference exists between bacterial and mammalian homologs with only the latter containing a large extracellular domain, the function of which is currently unknown. Here, we present the crystal structure of the extracellular domain from both PepT1 and PepT2 that reveal two immunoglobulin-like folds connected in tandem, providing structural insight into mammalian peptide transport. Functional and biophysical studies demonstrate that these domains interact with the intestinal protease trypsin, suggesting a role in clustering proteolytic activity to the site of peptide transport in eukaryotic cells.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCrystallography, X-RayEscherichia coliGene ExpressionHumansKineticsMiceModels, MolecularMolecular Sequence DataMutationOligopeptidesPeptide Transporter 1Protein BindingProtein Structure, Secondaryhydrogen-coupled oligopeptide transporter PepT2OligopeptidesPeptide Transporter 1Recombinant ProteinsSlc15a1 protein, mouseSymportersTrypsin

Identifiers

PMID26320580
PMCPMC4597091
OpenAlexW2158846356

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.