Evidence map›Paper›PMID 26319988›Full record

ArticleJournal of biomolecular NMR2015

Efficient segmental isotope labeling of multi-domain proteins using Sortase A.

Lee Freiburger, Miriam Sonntag, Janosch Hennig, Jian Li, Peijian Zou, Michael Sattler

Abstract read
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In one paragraph

Article in Journal of biomolecular NMR, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 86 citations in OpenAlex.

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  7. A Chemical Biology Primer for NMR Spectroscopists.Journal of magnetic resonance open · 2022
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  16. Deuteration Aiming for Neutron Scattering.Biophysics and physicobiology · 2021
    Article
  17. Micellar TIA1 with folded RNA binding domains as a model for reversible stress granule formation.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  18. Review
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Lee FreiburgerInstitute of Structural Biology, Helmholtz Zentrum München, 85764, Neuherberg, Germany. lee.freiburger@tum.de.
Miriam SonntagInstitute of Structural Biology, Helmholtz Zentrum München, 85764, Neuherberg, Germany. miriam.sonntag@mytum.de.
Janosch HennigInstitute of Structural Biology, Helmholtz Zentrum München, 85764, Neuherberg, Germany. janosch.hennig@helmholtz-muenchen.de.
Jian LiTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, China. lijianzhongbei@163.com.
Peijian ZouInstitute of Structural Biology, Helmholtz Zentrum München, 85764, Neuherberg, Germany. peijian.zou@helmholtz-muenchen.de.
Michael SattlerInstitute of Structural Biology, Helmholtz Zentrum München, 85764, Neuherberg, Germany. sattler@helmholtz-muenchen.de.
Chinese Academy of Sciences · CNHelmholtz Zentrum München · DETechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NMR studies of multi-domain protein complexes provide unique insight into their molecular interactions and dynamics in solution. For large proteins domain-selective isotope labeling is desired to reduce signal overlap, but available methods require extensive optimization and often give poor ligation yields. We present an optimized strategy for segmental labeling of multi-domain proteins using the S. aureus transpeptidase Sortase A. Critical improvements compared to existing protocols are (1) the efficient removal of cleaved peptide fragments by centrifugal filtration and (2) a strategic design of cleavable and non-cleavable affinity tags for purification. Our approach enables routine production of milligram amounts of purified segmentally labeled protein for NMR and other biophysical studies.

Indexed as

AminoacyltransferasesBacterial ProteinsCysteine EndopeptidasesElectrophoresis, Polyacrylamide GelIsotope LabelingProtein Structure, TertiaryProton Magnetic Resonance SpectroscopyStaphylococcus aureusAminoacyltransferasesBacterial ProteinsCysteine Endopeptidasessortase AMulti-domain proteinsProtein expressionProtein ligationSegmental isotope labelingSortase A

Identifiers

PMID26319988
OpenAlexW1904804177

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.