Evidence map›Paper›PMID 26318634›Full record

ReviewTranslational research : the journal of laboratory and clinical medicine2015

The impact of the Cancer Genome Atlas on lung cancer.

Jeremy T-H Chang, Yee Ming Lee, R Stephanie Huang

Abstract readReview
In one paragraph

Review in Translational research : the journal of laboratory and clinical medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 2 pooled it
2.5field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 2 syntheses or guidelines pooled it, 120 citations in OpenAlex.

  1. Pooled it
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  17. Deciphering the Role of CD14 inJournal of Cancer · 2025
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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jeremy T-H ChangBiological Sciences Collegiate Division, The University of Chicago, Chicago, Ill.
Yee Ming LeeCenter for Personalized Therapeutics, The University of Chicago, Chicago, Ill.
R Stephanie HuangDepartment of Medicine, The University of Chicago, Chicago, Ill. Electronic address: rhuang@medicine.bsd.uchicago.edu.
University of Chicago · US

Funding

VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI KUNLE ODUNSI · 1985 to 2026
$122.1M
Whole GenomeU01GM061393 · NIGMS · UNIVERSITY OF CHICAGO · PI RATAIN, MARK J · 2000 to 2014
$39.0M
TRANSLATIONAL RESEARCH UNIVERSITY OF CHICAGO: CLINICAL TRIALSUL1RR024999 · NCRR · UNIVERSITY OF CHICAGO · PI SOLWAY, JULIAN · 2007 to 2011
$25.3M
Variation in Hormone and xenobiotic metabolizing enzyme genes and breast cancerP50CA125183 · NCI · UNIVERSITY OF CHICAGO · PI COX, NANCY · 2006 to 2010
$11.3M
Genome-wide interrogation of genetic signatures for glucocorticoid sensitivityK08GM089941 · NIGMS · UNIVERSITY OF CHICAGO · PI HUANG, RONG STEPHANIE · 2010 to 2014
$498k
Incorporation of microRNA expression in pharmacogenetic prediction modelsR21CA139278 · NCI · UNIVERSITY OF CHICAGO · PI DOLAN, MARY EILEEN, HUANG, RONG STEPHANIE · 2009 to 2010
$378k
NCI NIH HHS CA125183NCI NIH HHS P30 CA014599NCI NIH HHS P30 CA14599NCI NIH HHS P50 CA125183NCI NIH HHS R21 CA139278NCRR NIH HHS UL1 RR024999NCRR NIH HHS UL1RR024999NIGMS NIH HHS K08 GM089941NIGMS NIH HHS K08GM089941NIGMS NIH HHS U01 GM061393NIGMS NIH HHS UO1GM61393
6 · The paper itself

Abstract

The Cancer Genome Atlas (TCGA) has profiled more than 10,000 samples derived from 33 types of cancer to date, with the goal of improving our understanding of the molecular basis of cancer and advancing our ability to diagnose, treat, and prevent cancer. This review focuses on lung cancer as it is the leading cause of cancer-related mortality worldwide in both men and women. Particularly, non-small cell lung cancers (including lung adenocarcinoma and lung squamous cell carcinoma) were evaluated. Our goal was to demonstrate the impact of TCGA on lung cancer research under 4 themes: diagnostic markers, disease progression markers, novel therapeutic targets, and novel tools. Examples are given related to DNA mutation, copy number variation, messenger RNA, and microRNA expression along with methylation profiling.

Indexed as

Atlases as TopicGenome, HumanHumansLung Neoplasms

Identifiers

PMID26318634
PMCPMC4656061
OpenAlexW1126567730

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.