Evidence map›Paper›PMID 26318484›Full record

ArticleBMC genomics2015

Long-term genomic selection for heterosis without dominance in multiplicative traits: case study of bunch production in oil palm.

David Cros, Marie Denis, Jean-Marc Bouvet, Leopoldo Sánchez

Abstract read
In one paragraph

Article in BMC genomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Genomic selection for morphological and yield-related traits using genome-wide SNPs in oil palm.Molecular breeding : new strategies in plant improvement · 2022
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Molecular approaches for improving oil palm for oil.Molecular breeding : new strategies in plant improvement · 2021
    Review
  11. Article
  12. Review
  13. Reciprocal recurrent genomic selection: an attractive tool to leverage hybrid wheat breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

David CrosGenetic Improvement and Adaptation of Mediterranean and Tropical Plants Research Unit (UMR AGAP), CIRAD, 34398, Montpellier, France. david.cros@cirad.fr.
Marie DenisGenetic Improvement and Adaptation of Mediterranean and Tropical Plants Research Unit (UMR AGAP), CIRAD, 34398, Montpellier, France. marie.denis@cirad.fr.
Jean-Marc BouvetGenetic Improvement and Adaptation of Mediterranean and Tropical Plants Research Unit (UMR AGAP), CIRAD, 34398, Montpellier, France. jean-marc.bouvet@cirad.fr.
Leopoldo SánchezForest Tree Improvement, Genetics and Physiology Research Unit (UR AGPF), INRA, 45075, Orleans, France. leopoldo.sanchez@orleans.inra.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTo study the potential of genomic selection for heterosis resulting from multiplicative interactions between additive and antagonistic components, we focused on oil palm, where bunch production is the product of bunch weight and bunch number. We simulated two realistic breeding populations and compared current reciprocal recurrent selection (RRS) with reciprocal recurrent genomic selection (RRGS) over four generations. All breeding strategies aimed at selecting the best individuals in parental populations to increase bunch production in hybrids. For RRGS, we obtained the parental genomic estimated breeding values using GBLUP with hybrid phenotypes as data records and population specific allele models. We studied the effects of four RRGS parameters on selection response and genetic parameters: (1) the molecular data used to calibrate the GS model: in RRGS_PAR, we used parental genotypes and in RRGS_HYB we also used hybrid genotypes; (2) frequency of progeny tests (model calibration); (3) number of candidates and (4) number of genotyped hybrids in RRGS_HYB.

resultsWe concluded that RRGS could increase the annual selection response compared to RRS by decreasing the generation interval and by increasing the selection intensity. With 1700 genotyped hybrids, calibration every four generations and 300 candidates per generation and population, selection response of RRGS_HYB was 71.8 % higher than RRS. RRGS_PAR with calibration every two generations and 300 candidates was a relevant alternative, as a good compromise between the annual response, risk around the expected response, increased inbreeding and cost. RRGS required inbreeding management because of a higher annual increase in inbreeding than RRS.

conclusionsRRGS appeared as a valuable method to achieve a long-term increase in the performance for a trait showing heterosis due to the multiplicative interaction between additive and negatively correlated components, such as oil palm bunch production.

Indexed as

ArecaceaeComputer SimulationGenomicsGenotypeHybridization, GeneticHybrid VigorInbreedingPalm OilPlant OilsQuantitative Trait LociSelection, GeneticTime FactorsPalm OilPlant Oils

Identifiers

PMID26318484
PMCPMC4552977

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.