Evidence map›Paper›PMID 26317977›Full record

ArticlePloS one2015

Structural Analysis of the Regulatory Domain of ExsA, a Key Transcriptional Regulator of the Type Three Secretion System in Pseudomonas aeruginosa.

Manisha Shrestha, Yi Xiao, Howard Robinson, Florian D Schubot

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. A Twist of Fate: The Helix-Turn-Helix Motif inJournal of chemical information and modeling · 2025
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Structural Insights into Regulation of Vibrio Virulence Gene Networks.Advances in experimental medicine and biology · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Effects of human β-defensin 3 fused with carbohydrate-binding domain on the function of type III secretion system in Pseudomonas aeruginosa PA14.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2020
    Article
  11. 1.65 Å resolution structure of the AraC-family transcriptional activator ToxT from Vibrio cholerae.Acta crystallographica. Section F, Structural biology communications · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Manisha ShresthaDepartment of Biological Sciences, Virginia Polytechnic Institute & State University, Washington Street, Blacksburg, VA 24060, United States of America.
Yi XiaoDepartment of Biological Sciences, Virginia Polytechnic Institute & State University, Washington Street, Blacksburg, VA 24060, United States of America.
Howard RobinsonBiology Department, Brookhaven National Laboratory, Upton, NY 11973-5000, United States of America.
Florian D SchubotDepartment of Biological Sciences, Virginia Polytechnic Institute & State University, Washington Street, Blacksburg, VA 24060, United States of America.
Virginia Tech · USBrookhaven National Laboratory · US

Funding

Case Center for Synchrotron BiosciencesP30EB009998 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2009 to 2018
$8.4M
Regulation of the P.aeruginosa Type III Secretion System by the Multifaceted TranR21AI101774 · NIAID · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI SCHUBOT, FLORIAN DAVID · 2012 to 2013
$375k
NIAID NIH HHS 1R21AI101774NIAID NIH HHS R21 AI101774NIBIB NIH HHS P30 EB009998
6 · The paper itself

Abstract

Pseudomonas aeruginosa employs a type three secretion system to facilitate infections in mammalian hosts. The operons encoding genes of structural components of the secretion machinery and associated virulence factors are all under the control of the AraC-type transcriptional activator protein, ExsA. ExsA belongs to a unique subfamily of AraC-proteins that is regulated through protein-protein contacts rather than small molecule ligands. Prior to infection, ExsA is inhibited through a direct interaction with the anti-activator ExsD. To activate ExsA upon host cell contact this interaction is disrupted by the anti-antiactivator protein ExsC. Here we report the crystal structure of the regulatory domain of ExsA, which is known to mediate ExsA dimerization as well as ExsD binding. The crystal structure suggests two models for the ExsA dimer. Both models confirmed the previously shown involvement of helix α-3 in ExsA dimerization but one also suggest a role for helix α-2. These structural data are supported by the observation that a mutation in α-2 greatly diminished the ability of ExsA to activate transcription in vitro. Additional in vitro transcription studies revealed that a conserved pocket, used by AraC and the related ToxT protein for the binding of small molecule regulators, although present in ExsA is not involved in binding of ExsD.

Indexed as

Bacterial Secretion SystemsModels, MolecularProtein MultimerizationBacterial ProteinsCrystallography, X-RayProtein BindingProtein Structure, QuaternaryProtein Structure, SecondaryProtein Structure, TertiaryPseudomonas aeruginosaRecombinant Fusion ProteinsRepressor ProteinsTrans-ActivatorsBacterial ProteinsBacterial Secretion SystemsExsA protein, Pseudomonas aeruginosaExsD protein, Pseudomonas aeruginosaRecombinant Fusion ProteinsRepressor ProteinsTrans-Activators

Identifiers

PMID26317977
PMCPMC4552939
OpenAlexW1930600971

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.