Evidence map›Paper›PMID 26317264›Full record

ArticleBioarchitecture2014

Comparative analysis of tools for live cell imaging of actin network architecture.

Brittany J Belin, Lauren M Goins, R Dyche Mullins

Open access · bronzeAbstract readComparative StudyVideo-Audio Media
In one paragraph

Article in Bioarchitecture, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 186 citations in OpenAlex.

  1. Article
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  3. Cell-nanoplastics association impacts cell proliferation and motility.bioRxiv : the preprint server for biology · 2026
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  4. Identification of optimal fluorophores for use in theMolecular biology of the cell · 2026
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  5. Article
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  7. Cryo-EM structure revealed a novel F-actin binding motif in abioRxiv : the preprint server for biology · 2025
    Article
  8. Article
  9. Article
  10. Decoding mEos4b day-long maturation and engineering fast-maturing variants.Protein science : a publication of the Protein Society · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Structure of the F-tractin-F-actin complex.The Journal of cell biology · 2025
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article

38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Brittany J Belina Cellular and Molecular Pharmacology; University of California ; San Francisco , CA USA.
Lauren M Goinsa Cellular and Molecular Pharmacology; University of California ; San Francisco , CA USA.
R Dyche Mullinsa Cellular and Molecular Pharmacology; University of California ; San Francisco , CA USA.
University of California System · US

Funding

STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008284 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORTEMME, TANJA · 1988 to 2022
$10.1M
MECHANISMS OF ARP2/3 ACTIVATION AND FUNCTIONR01GM061010 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MULLINS, R DYCHE · 2000 to 2015
$3.8M
Regulation and Function of a Bacterial CytoskeletonR01GM079556 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MULLINS, R DYCHE · 2006 to 2015
$2.1M
A role for nuclear actin filaments at damaged telomeresF31AG039147 · NIA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BELIN, BRITTANY JO · 2010 to 2012
$84k
Howard Hughes Medical InstituteNIA NIH HHS F31 AG039147NIGMS NIH HHS GM061010NIGMS NIH HHS GM079556NIGMS NIH HHS T32 GM008284
6 · The paper itself

Abstract

Fluorescent derivatives of actin and actin-binding domains are powerful tools for studying actin filament architecture and dynamics in live cells. Growing evidence, however, indicates that these probes are biased, and their cellular distribution does not accurately reflect that of the cytoskeleton. To understand the strengths and weaknesses of commonly used live-cell probes--fluorescent protein fusions of actin, Lifeact, F-tractin, and actin-binding domains from utrophin--we compared their distributions in cells derived from various model organisms. We focused on five actin networks: the peripheral cortex, lamellipodial and lamellar networks, filopodial bundles, and stress fibers. Using phalloidin as a standard, we identified consistent biases in the distribution of each probe. The localization of F-tractin is the most similar to that of phalloidin but induces organism-specific changes in cell morphology. Both Lifeact and GFP-actin concentrate in lamellipodial actin networks but are excluded from lamellar networks and filopodia. In contrast, the full utrophin actin-binding domain (Utr261) binds filaments of the lamellum but only weakly localizes to lamellipodia, while a shorter variant (Utr230) is restricted to the most stable subpopulations of actin filaments: cortical networks and stress fibers. In some cells, Utr230 also detects Golgi-associated filaments, previously detected by immunofluorescence but not visible by phalloidin staining. Consistent with its localization, Utr230 exhibits slow rates of fluorescence recovery after photobleaching (FRAP) compared to F-tractin, Utr261 and Lifeact, suggesting that it may be more useful for FRAP- and photo-activation-based studies of actin network dynamics.

Indexed as

Microscopy, VideoActin CytoskeletonActinsAnimalsBinding SitesCell LineCell ShapeConcanavalin ADrosophila melanogasterFluorescence Recovery After PhotobleachingHumansLuminescent ProteinsMiceMicroscopy, FluorescenceProtein BindingProtein Interaction Domains and MotifsActinsConcanavalin ALuminescent ProteinsRecombinant Fusion ProteinsUtrophinactincell architectureCytoskeletonfluorescent protein reporterslive cell imaging

Identifiers

PMID26317264
PMCPMC4914014
OpenAlexW2300192633

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.