Evidence map›Paper›PMID 26314407›Full record

ArticlePharmacogenomics2015

Evaluating the role of admixture in cancer therapy via in vitro drug response and multivariate genome-wide associations.

John Jack, Tammy M Havener, Howard L McLeod, Alison A Motsinger-Reif, Matthew Foster

Abstract read
In one paragraph

Article in Pharmacogenomics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.2field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

John JackDepartment of Statistics, North Carolina State University, 2601 Stinson Drive, Raleigh, NC 27695, USA.
Tammy M HavenerCenter for Pharmacogenomics & Individualized Therapy, University of North Carolina, 120 Mason Farm Road, Chapel Hill, NC 27514, USA.
Howard L McLeodDeBartolo Family Personalized Medicine Institute, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL 33612, USA.
Alison A Motsinger-ReifDepartment of Statistics, North Carolina State University, 2601 Stinson Drive, Raleigh, NC 27695, USA.
Matthew FosterLineberger Comprehensive Cancer Center, University of North Carolina, 101 Manning Drive, Chapel Hill, NC 27514, USA.
North Carolina State University · USUniversity of North Carolina at Chapel Hill · USMoffitt Cancer Center · US

Funding

Genetic Etiology of Cancer Drug ResponseR01CA161608 · NCI · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI WILTSHIRE, TIM, WRIGHT, FRED A. · 2012 to 2021
$4.0M
Biostatistics Training in the Omics EraT32GM081057 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MUSE, SPENCER V. · 2007 to 2019
$2.5M
NCI NIH HHS R01 CA161608NCI NIH HHS R01CA161608NIGMS NIH HHS T32 GM081057
6 · The paper itself

Abstract

aimWe investigate the role of ethnicity and admixture in drug response across a broad group of chemotherapeutic drugs. Also, we generate hypotheses on the genetic variants driving differential drug response through multivariate genome-wide association studies.

methodsImmortalized lymphoblastoid cell lines from 589 individuals (Hispanic or non-Hispanic/Caucasian) were used to investigate dose-response for 28 chemotherapeutic compounds. Univariate and multivariate statistical models were used to elucidate associations between genetic variants and differential drug response as well as the role of ethnicity in drug potency and efficacy. RESULTS &

conclusionFor many drugs, the variability in drug response appears to correlate with self-reported race and estimates of genetic ancestry. Additionally, multivariate genome-wide association analyses offered interesting hypotheses governing these differential responses.

Indexed as

Genome-Wide Association StudyAntineoplastic Combined Chemotherapy ProtocolsBlack or African AmericanCell Line, TumorCohort StudiesEthnicityGenetic VariationHispanic or LatinoHumansMultivariate AnalysisNeoplasmsPharmacogeneticsTreatment OutcomeWhite PeopleadmixturecancerCaucasiancytotoxicitydruggenome-wide association studyGWAShispanicin vitrolymphoblastoid cell lines

Identifiers

PMID26314407
PMCPMC5810848
OpenAlexW2099248424

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.