Evidence map›Paper›PMID 26312503›Full record

ArticleeLife2015

NUDT21-spanning CNVs lead to neuropsychiatric disease and altered MeCP2 abundance via alternative polyadenylation.

Vincenzo A Gennarino, Callison E Alcott, Chun-An Chen, Arindam Chaudhury, Madelyn A Gillentine, Jill A Rosenfeld, Sumit Parikh, James W Wheless, Elizabeth R Roeder, Dafne D G Horovitz and 7 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
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  5. Characterization and molecular targeting of CFIm25 (NUDT21/CPSF5) mRNA using miRNAs.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2025
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  18. RNA Modifications and RNA Metabolism in Neurological Disease Pathogenesis.International journal of molecular sciences · 2021
    Review
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  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 1 country.

Vincenzo A GennarinoDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Callison E AlcottJan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, United States.
Chun-An ChenDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Arindam ChaudhuryDepartment of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, United States.
Madelyn A GillentineDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Jill A RosenfeldDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.ORCID http://orcid.org/0000-0001-5664-7987
Sumit ParikhCenter for Child Neurology, Cleveland Clinic Children's Hospital, Cleveland, United States.
James W WhelessDepartment of Pediatric Neurology, Neuroscience Institute and Tuberous Sclerosis Clinic, Le Bonheur Children's Hospital, University of Tennessee Health Science Center, Memphis, United States.
Elizabeth R RoederDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Dafne D G HorovitzDepto de Genetica Medica, Instituto Nacional de Saude da Mulher, da Criança e do Adolescente Fernandes Figueira, Rio de Janeiro, Brazil.
Erin K RoneyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Janice L SmithDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Sau W CheungDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Wei LiDivision of Biostatistics, Dan L Duncan Cancer Center, Department of Molecular and Cellular Biology, Baylor College of Medicine, Houston, United States.
Joel R NeilsonDepartment of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, United States.
Christian P SchaafDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Huda Y ZoghbiDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, United States.
Baylor College of Medicine · USCleveland Clinic · USHoward Hughes Medical Institute · USUniversity of Tennessee Health Science Center · US

Funding

Steps towards a paternal gene activation therapy for Angelman syndromeU54HD083092 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI NELSON, DAVID LOREN, NEUL, JEFFREY L · 2014 to 2019
$7.8M
MOLECULAR PATHOGENESIS STUDIES OF RETT SYNDROMER01NS057819 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI ZOGHBI, HUDA Y · 2006 to 2025
$7.5M
PROGRAM IN HUMAN MOLECULAR GENETICST32GM008307 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 1990 to 2020
$6.6M
MOLECULAR STUDIES OF SPINOCEREBELLAR ATAXIS TYPE IR37NS027699 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI ZOGHBI, HUDA Y · 2015 to 2021
$2.8M
Translational control of EMT by the CELF1 RNA Binding ProteinR01CA190467 · NCI · BAYLOR COLLEGE OF MEDICINE · PI NEILSON, JOEL R · 2015 to 2021
$1.9M
Prospective Identification of Translational Regulators in EMTR21CA185769 · NCI · BAYLOR COLLEGE OF MEDICINE · PI NEILSON, JOEL R · 2015 to 2016
$379k
Howard Hughes Medical InstituteNCI NIH HHS R01 CA190467NCI NIH HHS R21 CA185769NICHD NIH HHS 1 U54 HD083092NICHD NIH HHS U54 HD083092NIGMS NIH HHS T32 GM008307NINDS NIH HHS 5R01NS057819NINDS NIH HHS R01 NS057819NINDS NIH HHS R37 NS027699
6 · The paper itself

Abstract

The brain is sensitive to the dose of MeCP2 such that small fluctuations in protein quantity lead to neuropsychiatric disease. Despite the importance of MeCP2 levels to brain function, little is known about its regulation. In this study, we report eleven individuals with neuropsychiatric disease and copy-number variations spanning NUDT21, which encodes a subunit of pre-mRNA cleavage factor Im. Investigations of MECP2 mRNA and protein abundance in patient-derived lymphoblastoid cells from one NUDT21 deletion and three duplication cases show that NUDT21 regulates MeCP2 protein quantity. Elevated NUDT21 increases usage of the distal polyadenylation site in the MECP2 3' UTR, resulting in an enrichment of inefficiently translated long mRNA isoforms. Furthermore, normalization of NUDT21 via siRNA-mediated knockdown in duplication patient lymphoblasts restores MeCP2 to normal levels. Ultimately, we identify NUDT21 as a novel candidate for intellectual disability and neuropsychiatric disease, and elucidate a mechanism of pathogenesis by MeCP2 dysregulation via altered alternative polyadenylation.

Indexed as

Gene DosageCleavage And Polyadenylation Specificity FactorGene DeletionGene DuplicationHumansLymphocytesMental DisordersMethyl-CpG-Binding Protein 2PolyadenylationRNA, MessengerCleavage And Polyadenylation Specificity FactorMECP2 protein, humanMethyl-CpG-Binding Protein 2Nudt21 protein, humanRNA, Messengeralternative polyadenylationhumanintellectual disabilityMeCP2neuropsychiatric diseaseneuroscienceNUDT21

Identifiers

PMID26312503
PMCPMC4586391
OpenAlexW2163975718

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.