Evidence map›Paper›PMID 26311884›Full record

ArticleJournal of virology2015

Genome-Wide Screen Reveals Valosin-Containing Protein Requirement for Coronavirus Exit from Endosomes.

Hui Hui Wong, Pankaj Kumar, Felicia Pei Ling Tay, Dimitri Moreau, Ding Xiang Liu, Frédéric Bard

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 79 citations in OpenAlex.

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  15. The p97 Inhibitor UPCDC-30245 Blocks Endo-Lysosomal Degradation.Pharmaceuticals (Basel, Switzerland) · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Hui Hui WongInstitute of Molecular and Cell Biology/A*STAR, Singapore, Singapore Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
Pankaj KumarInstitute of Molecular and Cell Biology/A*STAR, Singapore, Singapore.
Felicia Pei Ling TayInstitute of Molecular and Cell Biology/A*STAR, Singapore, Singapore.
Dimitri MoreauInstitute of Molecular and Cell Biology/A*STAR, Singapore, Singapore.
Ding Xiang LiuInstitute of Molecular and Cell Biology/A*STAR, Singapore, Singapore School of Biological Sciences, Nanyang Technological University, Singapore, Singapore dxliu@ntu.edu.sg fbard@imcb.a-star.edu.sg.
Frédéric BardInstitute of Molecular and Cell Biology/A*STAR, Singapore, Singapore Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore dxliu@ntu.edu.sg fbard@imcb.a-star.edu.sg.
Institute of Molecular and Cell Biology · SGNational University of Singapore · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

unlabelledCoronaviruses are RNA viruses with a large zoonotic reservoir and propensity for host switching, representing a real threat for public health, as evidenced by severe acute respiratory syndrome (SARS) and the emerging Middle East respiratory syndrome (MERS). Cellular factors required for their replication are poorly understood. Using genome-wide small interfering RNA (siRNA) screening, we identified 83 novel genes supporting infectious bronchitis virus (IBV) replication in human cells. Thirty of these hits can be placed in a network of interactions with viral proteins and are involved in RNA splicing, membrane trafficking, and ubiquitin conjugation. In addition, our screen reveals an unexpected role for valosin-containing protein (VCP/p97) in early steps of infection. Loss of VCP inhibits a previously uncharacterized degradation of the nucleocapsid N protein. This inhibition derives from virus accumulation in early endosomes, suggesting a role for VCP in the maturation of virus-loaded endosomes. The several host factors identified in this study may provide avenues for targeted therapeutics. IMPORTANCE: Coronaviruses are RNA viruses representing a real threat for public health, as evidenced by SARS and the emerging MERS. However, cellular factors required for their replication are poorly understood. Using genome-wide siRNA screening, we identified novel genes supporting infectious bronchitis virus (IBV) replication in human cells. The several host factors identified in this study may provide directions for future research on targeted therapeutics.

Indexed as

Adenosine TriphosphatasesAnimalsBlotting, WesternCell Cycle ProteinsCell LineChlorocebus aethiopsCoronavirus InfectionsEndosomesFluorescent Antibody TechniqueGenome-Wide Association StudyHumansInfectious bronchitis virusMolecular Sequence AnnotationRNA, Small InterferingValosin Containing ProteinVero CellsAdenosine TriphosphatasesCell Cycle ProteinsRNA, Small InterferingValosin Containing ProteinVCP protein, human

Identifiers

PMID26311884
PMCPMC4621105
OpenAlexW2174898867

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.