Evidence map›Paper›PMID 26310313›Full record

ArticleScientific reports2015

Susceptibility loci in lung cancer and COPD: association of IREB2 and FAM13A with pulmonary diseases.

Iwona Ziółkowska-Suchanek, Maria Mosor, Piotr Gabryel, Marcin Grabicki, Magdalena Żurawek, Marta Fichna, Ewa Strauss, Halina Batura-Gabryel, Wojciech Dyszkiewicz, Jerzy Nowak

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed, 2 pooled it
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 2 syntheses or guidelines pooled it, 55 citations in OpenAlex.

  1. Pooled it
  2. Different Associations Between theFrontiers in genetics · 2020
    Pooled it
  3. Review
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  10. Review
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  12. Single Nucleotide Polymorphisms ofAdvances in respiratory medicine · 2023
    Article
  13. The Influence ofGenes · 2023
    Article
  14. Integrating molecular interactions and gene expression to identify biomarkers and network modules of chronic obstructive pulmonary disease.Technology and health care : official journal of the European Society for Engineering and Medicine · 2022
    Article
  15. From COPD to Lung Cancer: Mechanisms Linking, Diagnosis, Treatment, and Prognosis.International journal of chronic obstructive pulmonary disease · 2022
    Review
  16. Article
  17. Article
  18. Hypoxia-InducedInternational journal of molecular sciences · 2021
    Article
  19. The most frequent PolishArchives of medical science : AMS · 2021
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Iwona Ziółkowska-SuchanekInstitute of Human Genetics, Polish Academy of Sciences, Strzeszyńska 32, Poznań, Poland.
Maria MosorInstitute of Human Genetics, Polish Academy of Sciences, Strzeszyńska 32, Poznań, Poland.
Piotr GabryelDepartment of Thoracic Surgery, University of Medical Sciences, 62 Szamarzewskiego Street, 60-569 Poznań, Poland.
Marcin GrabickiDepartment of Pulmonology, Allergology and Respiratory Oncology, Poznań University of Medical Sciences, 84 Szamarzewskiego Street, 60-569 Poland.
Magdalena ŻurawekInstitute of Human Genetics, Polish Academy of Sciences, Strzeszyńska 32, Poznań, Poland.
Marta FichnaInstitute of Human Genetics, Polish Academy of Sciences, Strzeszyńska 32, Poznań, Poland.
Ewa StraussInstitute of Human Genetics, Polish Academy of Sciences, Strzeszyńska 32, Poznań, Poland.
Halina Batura-GabryelDepartment of Pulmonology, Allergology and Respiratory Oncology, Poznań University of Medical Sciences, 84 Szamarzewskiego Street, 60-569 Poland.
Wojciech DyszkiewiczDepartment of Thoracic Surgery, University of Medical Sciences, 62 Szamarzewskiego Street, 60-569 Poznań, Poland.
Jerzy NowakInstitute of Human Genetics, Polish Academy of Sciences, Strzeszyńska 32, Poznań, Poland.
Poznan University of Medical Sciences · PLInstitute of Human Genetics · PLPolish Academy of Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome-wide association studies have identified loci at 15q25 (IREB2) and 4q22 (FAM13A), associated with lung cancer (LC) and chronic obstructive pulmonary disease (COPD). The aim of our research was to determine the association of IREB2 and FAM13A SNPs with LC and severe/very severe COPD patients. We examined IREB2 variants (rs2568494, rs2656069, rs10851906, rs13180) and FAM13A (rs1903003, rs7671167, rs2869967) among 1.141 participants (468 LC, 149 COPD, 524 smoking controls). The frequency of the minor IREB2 rs2568494 AA genotype, was higher in LC vs controls (P = 0.0081, OR = 1.682). The FAM13A rs2869967 was associated with COPD (minor CC genotype: P = 0.0007, OR = 2.414). The rs1903003, rs7671167 FAM13A variants confer a protective effect on COPD (both P < 0.002, OR < 0.405). Haplotype-based tests identified an association of the IREB2 AAAT haplotype with LC (P = 0.0021, OR = 1.513) and FAM13A TTC with COPD (P = 0.0013, OR = 1.822). Cumulative genetic risk score analyses (CGRS), derived by adding risk alleles, revealed that the risk for COPD increased with the growing number of the FAM13A risk alleles. OR (95% CI) for carriers of ≥5 risk alleles reached 2.998 (1.8 to 4.97) compared to the controls. This study confirms that the IREB2 variants contribute to an increased risk of LC, whereas FAM13A predisposes to increased susceptibility to COPD.

Indexed as

Genetic Association StudiesGenetic LociGenetic Predisposition to DiseaseAllelesCase-Control StudiesFemaleGene FrequencyGTPase-Activating ProteinsHaplotypesHumansIron Regulatory Protein 2Linkage DisequilibriumLogistic ModelsLung NeoplasmsMaleMiddle AgedFAM13A protein, humanGTPase-Activating ProteinsIron Regulatory Protein 2

Identifiers

PMID26310313
PMCPMC4550915
OpenAlexW2415417288

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.