Evidence map›Paper›PMID 26309239›Full record

ArticlePloS one2015

Characterization of the Complete Mitochondrial Genome of Cerura menciana and Comparison with Other Lepidopteran Insects.

Lishang Dai, Cen Qian, Congfen Zhang, Lei Wang, Guoqing Wei, Jun Li, Baojian Zhu, Chaoliang Liu

Abstract readComparative Study
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Organization of the mitochondrial genome ofFrontiers in genetics · 2022
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. The complete mitochondrial genome of theMitochondrial DNA. Part B, Resources · 2020
    Article
  11. Article
  12. Article
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Lishang DaiCollege of Life Science, Anhui Agricultural University, Anhui, Hefei, P.R. China.
Cen QianCollege of Life Science, Anhui Agricultural University, Anhui, Hefei, P.R. China.
Congfen ZhangCollege of Life Science, Anhui Agricultural University, Anhui, Hefei, P.R. China.
Lei WangCollege of Life Science, Anhui Agricultural University, Anhui, Hefei, P.R. China.
Guoqing WeiCollege of Life Science, Anhui Agricultural University, Anhui, Hefei, P.R. China.
Jun LiCollege of Life Science, Anhui Agricultural University, Anhui, Hefei, P.R. China.
Baojian ZhuCollege of Life Science, Anhui Agricultural University, Anhui, Hefei, P.R. China.
Chaoliang LiuCollege of Life Science, Anhui Agricultural University, Anhui, Hefei, P.R. China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The complete mitochondrial genome (mitogenome) of Cerura menciana (Lepidoptera: Notodontidae) was sequenced and analyzed in this study. The mitogenome is a circular molecule of 15,369 bp, containing 13 protein-coding genes (PCGs), two ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes and a A+T-rich region. The positive AT skew (0.031) indicated that more As than Ts were present. All PCGs were initiated by ATN codons, except for the cytochrome c oxidase subunit 1 (cox1) gene, which was initiated by CAG. Two of the 13 PCGs contained the incomplete termination codon T or TA, while the others were terminated with the stop codon TAA. The A+T-rich region was 372 bp in length and consisted of an 'ATAGA' motif followed by an 18 bp poly-T stretch, a microsatellite-like (AT)8 and a poly-A element upstream of the trnM gene. Results examining codon usage indicated that Asn, Ile, Leu2, Lys, Tyr and Phe were the six most frequently occurring amino acids, while Cys was the rarest. Phylogenetic relationships, analyzed based on the nucleotide sequences of the 13 PCGs from other insect mitogenomes, confirmed that C. menciana belongs to the Notodontidae family.

Indexed as

Genome, InsectGenome, MitochondrialAnimalsBase SequenceCodonDNA, IntergenicGenes, InsectLepidopteraLikelihood FunctionsMolecular Sequence DataNucleic Acid ConformationOpen Reading FramesPhylogenyRNA, RibosomalRNA, TransferSequence AlignmentCodonDNA, IntergenicRNA, RibosomalRNA, Transfer

Identifiers

PMID26309239
PMCPMC4550444

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.