ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2015
A Modular Architecture for Electronic Health Record-Driven Phenotyping.
Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
16 citing papers in PubMed.
- PhenoFit: a framework for determining computable phenotyping algorithm fitness for purpose and reuse.Journal of the American Medical Informatics Association : JAMIA · 2026Article
- Phenotype execution and modeling architecture to support disease surveillance and real-world evidence studies: English sentinel network evaluation.JAMIA open · 2024Article
- Design and validation of a FHIR-based EHR-driven phenotyping toolbox.Journal of the American Medical Informatics Association : JAMIA · 2022Article
- Transformation of Pathology Reports Into the Common Data Model With Oncology Module: Use Case for Colon Cancer.Journal of medical Internet research · 2020Article
- Toward cross-platform electronic health record-driven phenotyping using Clinical Quality Language.Learning health systems · 2020Article
- Developing a portable natural language processing based phenotyping system.BMC medical informatics and decision making · 2019Article
- Considerations for Improving the Portability of Electronic Health Record-Based Phenotype Algorithms.AMIA ... Annual Symposium proceedings. AMIA Symposium · 2019Article
- A case study evaluating the portability of an executable computable phenotype algorithm across multiple institutions and electronic health record environments.Journal of the American Medical Informatics Association : JAMIA · 2018Article
- iT2DMS: a Standard-Based Diabetic Disease Data Repository and its Pilot Experiment on Diabetic Retinopathy Phenotyping and Examination Results Integration.Journal of medical systems · 2018Article
- High-fidelity phenotyping: richness and freedom from bias.Journal of the American Medical Informatics Association : JAMIA · 2018Article
- PIE: A prior knowledge guided integrated likelihood estimation method for bias reduction in association studies using electronic health records data.Journal of the American Medical Informatics Association : JAMIA · 2018Article
- Clinical Decision Support: a 25 Year Retrospective and a 25 Year Vision.Yearbook of medical informatics · 2016Review
- Developing a data element repository to support EHR-driven phenotype algorithm authoring and execution.Journal of biomedical informatics · 2016Article
- Review and evaluation of electronic health records-driven phenotype algorithm authoring tools for clinical and translational research.Journal of the American Medical Informatics Association : JAMIA · 2015Review
- Integration of NLP2FHIR Representation with Deep Learning Models for EHR Phenotyping: A Pilot Study on Obesity Datasets.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational ScienceArticle
- Phenoflow: A Microservice Architecture for Portable Workflow-based Phenotype Definitions.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational ScienceArticle
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
12 authors.
Funding
Abstract
Increasing interest in and experience with electronic health record (EHR)-driven phenotyping has yielded multiple challenges that are at present only partially addressed. Many solutions require the adoption of a single software platform, often with an additional cost of mapping existing patient and phenotypic data to multiple representations. We propose a set of guiding design principles and a modular software architecture to bridge the gap to a standardized phenotype representation, dissemination and execution. Ongoing development leveraging this proposed architecture has shown its ability to address existing limitations.
Identifiers
26306258PMC4525215What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.