Evidence map›Paper›PMID 26306254›Full record

ArticleAMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science2015

A Prototype for Executable and Portable Electronic Clinical Quality Measures Using the KNIME Analytics Platform.

Huan Mo, Jennifer A Pacheco, Luke V Rasmussen, Peter Speltz, Jyotishman Pathak, Joshua C Denny, William K Thompson

Abstract read
In one paragraph

Article in AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Characterizing variability of electronic health record-driven phenotype definitions.Journal of the American Medical Informatics Association : JAMIA · 2023
    Article
  2. Design and validation of a FHIR-based EHR-driven phenotyping toolbox.Journal of the American Medical Informatics Association : JAMIA · 2022
    Article
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  11. A Decompositional Approach to Executing Quality Data Model Algorithms on the i2b2 Platform.AMIA Joint Summits on Translational Science proceedings. AMIA Joint Summits on Translational Science · 2016
    Article
  12. Desiderata for computable representations of electronic health records-driven phenotype algorithms.Journal of the American Medical Informatics Association : JAMIA · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Huan MoVanderbilt University, Nashville, TN.
Jennifer A PachecoNorthwestern University, Chicago, IL.
Luke V RasmussenNorthwestern University, Chicago, IL.
Peter SpeltzVanderbilt University, Nashville, TN.
Jyotishman PathakMayo Clinic, Rochester, MN.
Joshua C DennyVanderbilt University, Nashville, TN.
William K ThompsonNorthShore University HealthSystem, Evanston, IL.

Funding

Genomic Basis of Susceptibility to COVID-19 Infection and its ComplicationsU01HG006379 · NHGRI · MAYO CLINIC ROCHESTER · PI Richard R. Sharp · 2011 to 2026
$16.5M
National Infrastructure for Standardized and Portable EHR Phenotyping AlgorithmsR01GM105688 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI LUO, YUAN, PATHAK, JYOTISHMAN · 2013 to 2020
$5.7M
A Personalized Genomic Medicine Pilot Program Using the NJgene eMERGE ExperienceU01HG006388 · NHGRI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI CHISHOLM, REX L, SMITH, MAUREEN E · 2011 to 2014
$4.1M
Vanderbilt Genome Electronic Records ProjectU01HG006378 · NHGRI · VANDERBILT UNIVERSITY · PI RODEN, DAN M · 2011 to 2014
$4.0M
NHGRI NIH HHS U01 HG006378NHGRI NIH HHS U01 HG006379NHGRI NIH HHS U01 HG006388NIGMS NIH HHS R01 GM105688
6 · The paper itself

Abstract

Electronic clinical quality measures (eCQMs) based on the Quality Data Model (QDM) cannot currently be executed against non-standardized electronic health record (EHR) data. To address this gap, we prototyped an implementation of a QDM-based eCQM using KNIME, an open-source platform comprising a wide array of computational workflow tools that are collectively capable of executing QDM-based logic, while also giving users the flexibility to customize mappings from site-specific EHR data. To prototype this capability, we implemented eCQM CMS30 (titled: Statin Prescribed at Discharge) using KNIME. The implementation contains value set modules with connections to the National Library of Medicine's Value Set Authority Center, QDM Data Elements that can query a local EHR database, and logical and temporal operators. We successfully executed the KNIME implementation of CMS30 using data from the Vanderbilt University and Northwestern University EHR systems.

Identifiers

PMID26306254
PMCPMC4525225

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.