Evidence map›Paper›PMID 26305532›Full record

ArticleInvestigative ophthalmology & visual science2015

Genetic Evidence for Differential Regulation of Corneal Epithelial and Stromal Thickness.

Demelza R Koehn, Kacie J Meyer, Michael G Anderson

Open access · hybridAbstract read
In one paragraph

Article in Investigative ophthalmology & visual science, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 16 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Demelza R KoehnDepartment of Molecular Physiology and Biophysics University of Iowa, Iowa City, Iowa, United States.
Kacie J MeyerDepartment of Molecular Physiology and Biophysics University of Iowa, Iowa City, Iowa, United States.
Michael G AndersonDepartment of Molecular Physiology and Biophysics University of Iowa, Iowa City, Iowa, United States 2Department of Ophthalmology and Visual Sciences, University of Iowa, Iowa City, Iowa, United States 3Center for the Prevention and Treatment of Visual Lo.
University of Iowa · USIowa City VA Health Care System · US

Funding

Genetics of Quantitative Traits Associated with GlaucomaR01EY018825 · NEI · UNIVERSITY OF IOWA · PI FINGERT, JOHN H · 2009 to 2013
$3.2M
Genetic dissection of pigment dispersing iris diseaseR01EY017673 · NEI · UNIVERSITY OF IOWA · PI ANDERSON, MICHAEL G · 2008 to 2017
$3.1M
Identification of molecular pathways contributing to central corneal thicknessF32EY021436 · NEI · UNIVERSITY OF IOWA · PI KOEHN, DEMELZA · 2011 to 2013
$168k
NEI NIH HHS EY017673NEI NIH HHS EY018825NEI NIH HHS EY021436NEI NIH HHS F32 EY021436NEI NIH HHS R01 EY017673NEI NIH HHS R01 EY018825
6 · The paper itself

Abstract

purposeCentral corneal thickness (CCT) is a quantitative trait associated with keratoconus and primary open-angle glaucoma. Although CCT is highly heritable, known genetic variations explain only a fraction of the phenotypic variability. The purpose of this study was to identify additional CCT-influencing loci using inbred strains of mice.

methodsCohorts of 82 backcrossed (N2) and 99 intercrossed (F2) mice were generated from crosses between recombinant inbred BXD24/TyJ and wild-derived CAST/EiJ mice. Using anterior chamber optical coherence tomography, mice were phenotyped at 10 to 12 weeks of age, genotyped based on 96 genome-wide single nucleotide polymorphisms (SNPs), and subjected to quantitative trait locus (QTL) analysis.

resultsIn an analysis of total CCT among all mice, two loci passed the significance threshold of P = 0.05. These were on Chr 3 and Chr 11 (Cctq4 and Cctq5, respectively). A third locus of interest was identified in a two-dimensional pairwise analysis; this locus on Chr 14 (Cctq6) exhibited a significant additive effect with Cctq5. Independent analyses of the dataset for epithelial and stromal thickness revealed that Cctq4 is specific to the epithelial layer and that Cctq5 and Cctq6 are specific to the stromal layer.

conclusionsOur findings demonstrate a quantitative multigenic pattern of CCT inheritance in mice and identify three previously unrecognized CCT-influencing loci: Cctq4, Cctq5, and Cctq6. This is the first demonstration that distinct layers of the cornea are under differential genetic control and highlights the need to refine the design of future genome-wide association studies of CCT.

Indexed as

Polymorphism, Single NucleotideAnimalsChromosome MappingCorneal PachymetryCorneal StromaDisease Models, AnimalEpithelium, CornealFemaleGenotypeGlaucoma, Open-AngleMaleMiceMice, Inbred C57BLMice, Inbred DBAPhenotypeQuantitative Trait Loci

Identifiers

PMID26305532
PMCPMC4553932
OpenAlexW2408992787

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.