Evidence map›Paper›PMID 26303932›Full record

ArticleBMC microbiology2015

Bifidobacteria grown on human milk oligosaccharides downregulate the expression of inflammation-related genes in Caco-2 cells.

Saumya Wickramasinghe, Alline R Pacheco, Danielle G Lemay, David A Mills

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
5.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 79 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Review
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Frontiers in microbiology · 2024
    Article
  11. Article
  12. Milk phospholipids protectFrontiers in nutrition · 2023
    Article
  13. Review
  14. Review
  15. Review
  16. Brain, behavior, & immunity - health · 2021
    Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Saumya WickramasingheDepartment of Basic Veterinary Sciences, University of Peradeniya, Peradeniya, 20400, Sri Lanka. saumyawicks@gmail.com.
Alline R PachecoFoods for Health Institute University of California, Davis, Davis, CA, 95616, USA. alline.roberta.pacheco@gmail.com.
Danielle G LemayFoods for Health Institute University of California, Davis, Davis, CA, 95616, USA. dglemay@ucdavis.edu.
David A MillsFoods for Health Institute University of California, Davis, Davis, CA, 95616, USA. damills@ucdavis.edu.
University of California, Davis · USUniversity of Peradeniya · LK

Funding

Activation of probiotic bifidobacteria by milk glyansR01AT008759 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GERMAN, BRUCE, LEBRILLA, CARLITO B · 2014 to 2018
$4.2M
Mechanism of Activation of Probiotic Bifidobacteria by Prebiotic Milk GlycansR01AT007079 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GERMAN, BRUCE, LEBRILLA, CARLITO B · 2012 to 2016
$2.2M
Activation of Host-Probiotic Communication by Prebiotic Milk OligosaccharidesR21AT006180 · NCCIH · UNIVERSITY OF CALIFORNIA AT DAVIS · PI MILLS, DAVID ANDREW, RAYBOULD, HELEN E · 2011 to 2012
$421k
NCCIH NIH HHS R01 AT007079NCCIH NIH HHS R01AT007079NCCIH NIH HHS R01 AT008759NCCIH NIH HHS R01AT008759NCCIH NIH HHS R21 AT006180NCCIH NIH HHS R21AT006180
6 · The paper itself

Abstract

backgroundBreastfed human infants are predominantly colonized by bifidobacteria that thrive on human milk oligosaccharides (HMO). Two predominant species of bifidobacteria in infant feces are Bifidobacterium breve (B. breve) and Bifidobacterium longum subsp. infantis (B. infantis), both of which include avid HMO-consumer strains. Our laboratory has previously shown that B. infantis, when grown on HMO, increases adhesion to intestinal cells and increases the expression of the anti-inflammatory cytokine interleukin-10. The purpose of the current study was to investigate the effects of carbon source-glucose, lactose, or HMO-on the ability of B. breve and B. infantis to adhere to and affect the transcription of intestinal epithelial cells on a genome-wide basis.

resultsHMO-grown B. infantis had higher percent binding to Caco-2 cell monolayers compared to B. infantis grown on glucose or lactose. B. breve had low adhesive ability regardless of carbon source. Despite differential binding ability, both HMO-grown strains significantly differentially affected the Caco-2 transcriptome compared to their glucose or lactose grown controls. HMO-grown B. breve and B. infantis both downregulated genes in Caco-2 cells associated with chemokine activity.

conclusionThe choice of carbon source affects the interaction of bifidobacteria with intestinal epithelial cells. HMO-grown bifidobacteria reduce markers of inflammation, compared to glucose or lactose-grown bifidobacteria. In the future, the design of preventative or therapeutic probiotic supplements may need to include appropriately chosen prebiotics.

Indexed as

Bacterial AdhesionBifidobacteriumCaco-2 CellsGene Expression ProfilingGlucoseHumansLactoseMilk, HumanMolecular Sequence DataOligosaccharidesSequence Analysis, DNAGlucoseLactoseOligosaccharides

Identifiers

PMID26303932
PMCPMC4548914
OpenAlexW1948855200

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.