Evidence map›Paper›PMID 26303660›Full record

ArticleMolecular psychiatry2016

CNS-specific regulatory elements in brain-derived HIV-1 strains affect responses to latency-reversing agents with implications for cure strategies.

L R Gray, D Cowley, C Welsh, H K Lu, B J Brew, S R Lewin, S L Wesselingh, P R Gorry, M J Churchill

Open access · hybridAbstract read
In one paragraph

Article in Molecular psychiatry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 37 citations in OpenAlex.

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  13. Beneficial and Adverse Effects of cART Affect Neurocognitive Function in HIV-1 Infection: Balancing Viral Suppression against Neuronal Stress and Injury.Journal of neuroimmune pharmacology : the official journal of the Society on NeuroImmune Pharmacology · 2021
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  19. Microglial Cells: The Main HIV-1 Reservoir in the Brain.Frontiers in cellular and infection microbiology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

L R GrayCentre for Biomedical Research, Burnet Institute, Melbourne, Victoria, Australia.
D CowleyMurdoch Childrens Research Institute, Melbourne, Victoria, Australia.
C WelshCentre for Biomedical Research, Burnet Institute, Melbourne, Victoria, Australia.
H K LuCentre for Biomedical Research, Burnet Institute, Melbourne, Victoria, Australia.
B J BrewDepartments of Neurology, Immunology and Infectious Diseases and Peter Duncan Neurosciences Unit, St Vincent's Centre for Applied Medical Research, St Vincent's Hospital, Sydney, New South Wales, Australia.
S R LewinCentre for Biomedical Research, Burnet Institute, Melbourne, Victoria, Australia.
S L WesselinghCentre for Biomedical Research, Burnet Institute, Melbourne, Victoria, Australia.
P R GorryCentre for Biomedical Research, Burnet Institute, Melbourne, Victoria, Australia.
M J ChurchillCentre for Biomedical Research, Burnet Institute, Melbourne, Victoria, Australia.
Monash University · AUBurnet Institute · AUMurdoch Children's Research Institute · AUSouth Australian Health and Medical Research Institute · AUSt Vincent's Hospital Sydney · AUUniversity of Melbourne · AU

Funding

Viral reservoirs and sanctuaries in HAART - treated patients: role and mechanismsU19AI096109 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SCHACKER, TIMOTHY W · 2011 to 2015
$29.5M
NIAID NIH HHS U19 AI096109NIMH NIH HHS R21 MH1022066
6 · The paper itself

Abstract

Latency-reversing agents (LRAs), including histone deacetylase inhibitors (HDACi), are being investigated as a strategy to eliminate latency in HIV-infected patients on suppressive antiretroviral therapy. The effectiveness of LRAs in activating latent infection in HIV strains derived from the central nervous system (CNS) is unknown. Here we show that CNS-derived HIV-1 strains possess polymorphisms within and surrounding the Sp transcription factor motifs in the long terminal repeat (LTR). These polymorphisms result in decreased ability of the transcription factor specificity protein 1 to bind CNS-derived LTRs, reducing the transcriptional activity of CNS-derived viruses. These mutations result in CNS-derived viruses being less responsive to activation by the HDACi panobinostat and romidepsin compared with lymphoid-derived viruses from the same subjects. Our findings suggest that HIV-1 strains residing in the CNS have unique transcriptional regulatory mechanisms, which impact the regulation of latency, the consideration of which is essential for the development of HIV-1 eradication strategies.

Indexed as

AdultBrainCD4-Positive T-LymphocytesCentral Nervous SystemCohort StudiesDepsipeptidesHistone Deacetylase InhibitorsHIV-1HIV InfectionsHumansHydroxamic AcidsIndolesJurkat CellsMaleMiddle AgedPanobinostatDepsipeptidesHistone Deacetylase InhibitorsHydroxamic AcidsIndolesPanobinostatromidepsin

Identifiers

PMID26303660
PMCPMC4804184
OpenAlexW1888634563

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.