Evidence map›Paper›PMID 26303528›Full record

ArticleMolecular and cellular biology2015

The DEK Oncoprotein Is a Critical Component of the EKLF/KLF1 Enhancer in Erythroid Cells.

Felix Lohmann, Mohan Dangeti, Shefali Soni, Xiaoyong Chen, Antanas Planutis, Margaret H Baron, Kyunghee Choi, James J Bieker

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Felix LohmannDepartment of Developmental and Regenerative Biology, Mount Sinai School of Medicine, New York, New York, USA.
Mohan DangetiDepartment of Developmental and Regenerative Biology, Mount Sinai School of Medicine, New York, New York, USA.
Shefali SoniDepartment of Developmental and Regenerative Biology, Mount Sinai School of Medicine, New York, New York, USA.
Xiaoyong ChenDepartment of Developmental and Regenerative Biology, Mount Sinai School of Medicine, New York, New York, USA.
Antanas PlanutisDepartment of Developmental and Regenerative Biology, Mount Sinai School of Medicine, New York, New York, USA.
Margaret H BaronDepartment of Developmental and Regenerative Biology, Mount Sinai School of Medicine, New York, New York, USA Black Family Stem Cell Institute, Mount Sinai School of Medicine, New York, New York, USA Tisch Cancer Institute, Mount Sinai School of Medicine, New York, New York, USA Department of Medicine, Mount Sinai School of Medicine, New York, New York, USA.
Kyunghee ChoiDepartment of Pathology, Washington University School of Medicine, St. Louis, Missouri, USA.
James J BiekerDepartment of Developmental and Regenerative Biology, Mount Sinai School of Medicine, New York, New York, USA Black Family Stem Cell Institute, Mount Sinai School of Medicine, New York, New York, USA Tisch Cancer Institute, Mount Sinai School of Medicine, New York, New York, USA james.bieker@mssm.edu.
Icahn School of Medicine at Mount Sinai · USWashington University in St. Louis · US

Funding

Function of Putative Determinant in HematopoiesisR01DK046865 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI JAMES J BIEKER · 1993 to 2026
$11.2M
Hemangioglast Development and RegulationR01HL055337 · NHLBI · WASHINGTON UNIVERSITY · PI CHOI, KYUNGHEE · 2001 to 2024
$9.1M
HEMATOPOIETIC COMMITMENT: MOLECULAR MECHANISMSR01HL063736 · NHLBI · WASHINGTON UNIVERSITY · PI CHOI, KYUNGHEE · 2000 to 2016
$5.6M
Induction and Specification of Hematopoietic MesodermR01HL062248 · NHLBI · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BARON, MARGARET H · 2000 to 2016
$5.5M
INDUCTION OF YOLK SAC HEMATOPOIETIC MESODERM BY BMP-4R01DK052191 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BARON, MARGARET H · 1997 to 2011
$4.2M
HEMATOPOIETIC STEM CELL COMMITMENT--MOLECULAR REGULATIONR01DK048721 · NIDDK · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI BIEKER, JAMES J · 1996 to 2004
$1.0M
NHLBI NIH HHS R01 HL055337NHLBI NIH HHS R01 HL062248NHLBI NIH HHS R01 HL063736NHLBI NIH HHS R01 HL55337NIDDK NIH HHS DK46865NIDDK NIH HHS R01 DK046865NIDDK NIH HHS R01 DK048721NIDDK NIH HHS R01 DK052191NIDDK NIH HHS R01 DK48721
6 · The paper itself

Abstract

Understanding how transcriptional regulators are themselves controlled is important in attaining a complete picture of the intracellular effects that follow signaling cascades during early development and cell-restricted differentiation. We have addressed this issue by focusing on the regulation of EKLF/KLF1, a zinc finger transcription factor that plays a necessary role in the global regulation of erythroid gene expression. Using biochemical affinity purification, we have identified the DEK oncoprotein as a critical factor that interacts with an essential upstream enhancer element of the EKLF promoter and exerts a positive effect on EKLF levels. This element also binds a core set of erythroid transcription factors, suggesting that DEK is part of a tissue-restricted enhanceosome that contains BMP4-dependent and -independent components. Together with local enrichment of properly coded histones and an open chromatin domain, optimal transcriptional activation of the EKLF locus can be established.

Indexed as

Promoter Regions, GeneticAmino Acid SequenceAnimalsBase SequenceBone Morphogenetic Protein 4Cell LineCell Line, TumorChromosomal Proteins, Non-HistoneErythroid CellsGene Expression RegulationHumansKruppel-Like Transcription FactorsMiceMolecular Sequence DataOncogene ProteinsPoly-ADP-Ribose Binding ProteinsBone Morphogenetic Protein 4Chromosomal Proteins, Non-HistoneDEK protein, humanerythroid Kruppel-like factorKruppel-Like Transcription FactorsOncogene ProteinsPoly-ADP-Ribose Binding ProteinsRecombinant Proteins

Identifiers

PMID26303528
PMCPMC4589598
OpenAlexW2102515668

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.