Evidence map›Paper›PMID 26302380›Full record

ArticlePLoS neglected tropical diseases2015

Short-term Forecasting of the Prevalence of Trachoma: Expert Opinion, Statistical Regression, versus Transmission Models.

Fengchen Liu, Travis C Porco, Abdou Amza, Boubacar Kadri, Baido Nassirou, Sheila K West, Robin L Bailey, Jeremy D Keenan, Anthony W Solomon, Paul M Emerson and 2 more

Erratum issued Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT00792922 (Research to Programs for Trachoma Elimination), which is not on this map. Cited by 13 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 2 pooled it
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT00792922 phase4completednot on this map

Research to Programs for Trachoma Elimination: Antibiotic Trial

TypeinterventionalSponsorJohns Hopkins UniversityRan2008 to 2014Enrolled128ConditionsTrachomaArmsAzithromycin
3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 2 syntheses or guidelines pooled it, 22 citations in OpenAlex.

  1. Antibiotics for trachoma.The Cochrane database of systematic reviews · 2019
    Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Article
  7. Models of Trachoma Transmission and Their Policy Implications: From Control to Elimination.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2018
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 8 institutions in 5 countries.

Fengchen LiuFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America.
Travis C PorcoFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America; Department of Ophthalmology, University of California San Francisco, San Francisco, California, United States of America; Department of Epidemiology & Biostatistics, University of California San Francisco, San Francisco, California, United States of America.
Abdou AmzaProgramme FSS/Université Abdou Moumouni de Niamey, Programme National de Santé Oculaire, Niamey, Niger.
Boubacar KadriProgramme FSS/Université Abdou Moumouni de Niamey, Programme National de Santé Oculaire, Niamey, Niger.
Baido NassirouProgramme FSS/Université Abdou Moumouni de Niamey, Programme National de Santé Oculaire, Niamey, Niger.
Sheila K WestDana Center for Preventive Ophthalmology, Wilmer Eye Institute, Johns Hopkins University, Baltimore, Maryland, United States of America.
Robin L BaileyClinical Research Unit, Department of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, United Kingdom.
Jeremy D KeenanFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America; Department of Ophthalmology, University of California San Francisco, San Francisco, California, United States of America.
Anthony W SolomonDepartment of Control of Neglected Tropical Diseases, World Health Organization, Geneva, Switzerland.
Paul M EmersonInternational Trachoma Initiative, Atlanta, Georgia, United States of America.
Manoj GambhirDepartment of Epidemiology and Preventive Medicine, Monash University, Melbourne, Australia.
Thomas M LietmanFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, California, United States of America; Department of Ophthalmology, University of California San Francisco, San Francisco, California, United States of America; Department of Epidemiology & Biostatistics, University of California San Francisco, San Francisco, California, United States of America.
Abdou Moumouni University · NESan Francisco Foundation · USUniversity of California, San Francisco · USInternational Trachoma Initiative · USJohns Hopkins Medicine · USLondon School of Hygiene & Tropical Medicine · GBMonash University · AUWorld Health Organization · CH

Funding

"Modeling contact investigation and rapid response"U01GM087728 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PORCO, TRAVIS CHRISTIAN · 2011 to 2015
$2.2M
NIGMS NIH HHS U01 GM087728NIGMS NIH HHS U01GM08778Wellcome Trust 100714World Health Organization 001
6 · The paper itself

Abstract

backgroundTrachoma programs rely on guidelines made in large part using expert opinion of what will happen with and without intervention. Large community-randomized trials offer an opportunity to actually compare forecasting methods in a masked fashion.

methodsThe Program for the Rapid Elimination of Trachoma trials estimated longitudinal prevalence of ocular chlamydial infection from 24 communities treated annually with mass azithromycin. Given antibiotic coverage and biannual assessments from baseline through 30 months, forecasts of the prevalence of infection in each of the 24 communities at 36 months were made by three methods: the sum of 15 experts' opinion, statistical regression of the square-root-transformed prevalence, and a stochastic hidden Markov model of infection transmission (Susceptible-Infectious-Susceptible, or SIS model). All forecasters were masked to the 36-month results and to the other forecasts. Forecasts of the 24 communities were scored by the likelihood of the observed results and compared using Wilcoxon's signed-rank statistic.

findingsRegression and SIS hidden Markov models had significantly better likelihood than community expert opinion (p = 0.004 and p = 0.01, respectively). All forecasts scored better when perturbed to decrease Fisher's information. Each individual expert's forecast was poorer than the sum of experts.

interpretationRegression and SIS models performed significantly better than expert opinion, although all forecasts were overly confident. Further model refinements may score better, although would need to be tested and compared in new masked studies. Construction of guidelines that rely on forecasting future prevalence could consider use of mathematical and statistical models.

trial registrationClinicaltrials.gov NCT00792922.

Indexed as

Anti-Bacterial AgentsChildChild, PreschoolEndemic DiseasesForecastingHumansInfantModels, BiologicalNigerPrevalenceRandomized Controlled Trials as TopicRegression AnalysisTrachomaAnti-Bacterial Agents

Identifiers

PMID26302380
PMCPMC4547743
OpenAlexW2121206601

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.