Evidence map›Paper›PMID 26301573›Full record

ArticleBioconjugate chemistry2015

Fluorogenic Green-Inside Red-Outside (GIRO) Labeling Approach Reveals Adenylyl Cyclase-Dependent Control of BKα Surface Expression.

Christopher P Pratt, Jianjun He, Yi Wang, Alison L Barth, Marcel P Bruchez

Abstract read
In one paragraph

Article in Bioconjugate chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Biofilm dispersal patterns revealed using far-red fluorogenic probes.bioRxiv : the preprint server for biology · 2024
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  5. Article
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  7. Interrogating surfaceChemical science · 2020
    Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Single-molecule labeling for studying trafficking of renal transporters.American journal of physiology. Renal physiology · 2018
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Christopher P PrattDepartment of Biological Sciences, ‡Department of Chemistry, §Molecular Biosensor and Imaging Center, and #Center for the Neural Basis of Cognition, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States.
Jianjun HeDepartment of Biological Sciences, ‡Department of Chemistry, §Molecular Biosensor and Imaging Center, and #Center for the Neural Basis of Cognition, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States.
Yi WangDepartment of Biological Sciences, ‡Department of Chemistry, §Molecular Biosensor and Imaging Center, and #Center for the Neural Basis of Cognition, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States.
Alison L BarthDepartment of Biological Sciences, ‡Department of Chemistry, §Molecular Biosensor and Imaging Center, and #Center for the Neural Basis of Cognition, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States.
Marcel P BruchezDepartment of Biological Sciences, ‡Department of Chemistry, §Molecular Biosensor and Imaging Center, and #Center for the Neural Basis of Cognition, Carnegie Mellon University , 4400 Fifth Avenue, Pittsburgh, Pennsylvania 15213, United States.
Imaging Center · USCarnegie Mellon University · USCenter for the Neural Basis of Cognition · US

Funding

Translational StudiesP30DK072506 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ALCORN, JOHN F · 2005 to 2017
$12.5M
SINGLE MOLECULE DETECTION OF ION CHANNELS IN NEURONSR21MH100612 · NIMH · CARNEGIE-MELLON UNIVERSITY · PI BARTH, ALISON L, BRUCHEZ, MARCEL P · 2013 to 2014
$420k
NIDDK NIH HHS P30 DK072506NIDDK NIH HHS P30DK072506NIMH NIH HHS R21 MH100612NIMH NIH HHS R21MH100612
6 · The paper itself

Abstract

The regulation of surface levels of protein is critical for proper cell function and influences properties including cell adhesion, ion channel contributions to current flux, and the sensitivity of surface receptors to ligands. Here we demonstrate a two-color labeling system in live cells using a single fluorogen activating peptide (FAP) based fusion tag, which enables the rapid and simultaneous quantification of surface and internal proteins. In the nervous system, BK channels can regulate neural excitability and neurotransmitter release, and the surface trafficking of BK channels can be modulated by signaling cascades and assembly with accessory proteins. Using this labeling approach, we examine the dynamics of BK channel surface expression in HEK293 cells. Surface pools of the pore-forming BKα subunit were stable, exhibiting a plasma membrane half-life of >10 h. Long-term activation of adenylyl cyclase by forskolin reduced BKα surface levels by 30%, an effect that could not be attributed to increased bulk endocytosis of plasma membrane proteins. This labeling approach is compatible with microscopic imaging and flow cytometry, providing a solid platform for examining protein trafficking in living cells.

Indexed as

Adenylyl CyclasesAnimalsColforsinColorFluorescent DyesGene ExpressionHEK293 CellsHumansLarge-Conductance Calcium-Activated Potassium Channel alpha SubunitsMiceModels, MolecularPeptidesProtein ConformationStaining and LabelingAdenylyl CyclasesColforsinFluorescent DyesLarge-Conductance Calcium-Activated Potassium Channel alpha SubunitsPeptides

Identifiers

PMID26301573
PMCPMC4576318
OpenAlexW2417394123

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.