Evidence map›Paper›PMID 26297805›Full record

ArticleeLife2015

Wild worm embryogenesis harbors ubiquitous polygenic modifier variation.

Annalise B Paaby, Amelia G White, David D Riccardi, Kristin C Gunsalus, Fabio Piano, Matthew V Rockman

Abstract read
In one paragraph

Article in eLife, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Article
  2. Article
  3. Intraspecific variation in the duration of epigenetic inheritance.bioRxiv : the preprint server for biology · 2025
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  5. Faster genetic mapping of complex traits inmicroPublication biology · 2025
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  15. Review
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  19. Loss-of-function mutation survey revealed that genes with background-dependent fitness are rare and functionally related in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Annalise B PaabyDepartment of Biology and Center for Genomics and Systems Biology, New York University, New York, United States.
Amelia G WhiteDepartment of Biology and Center for Genomics and Systems Biology, New York University, New York, United States.
David D RiccardiDepartment of Biology and Center for Genomics and Systems Biology, New York University, New York, United States.
Kristin C GunsalusDepartment of Biology and Center for Genomics and Systems Biology, New York University, New York, United States.
Fabio PianoDepartment of Biology and Center for Genomics and Systems Biology, New York University, New York, United States.
Matthew V RockmanDepartment of Biology and Center for Genomics and Systems Biology, New York University, New York, United States.

Funding

Discovery and Characterization of Quantitative Trait NucleotidesR01GM089972 · NIGMS · NEW YORK UNIVERSITY · PI ROCKMAN, MATTHEW · 2009 to 2013
$1.5M
Discovering buffered developmental networks underlying C. elegans embryogenesisF32GM090557 · NIGMS · NEW YORK UNIVERSITY · PI PAABY, ANNALISE BLOSS · 2010 to 2012
$115k
NIGMS NIH HHS F32 GM090557NIGMS NIH HHS GM089972NIGMS NIH HHS GM090557NIGMS NIH HHS R01 GM089972
6 · The paper itself

Abstract

Embryogenesis is an essential and stereotypic process that nevertheless evolves among species. Its essentiality may favor the accumulation of cryptic genetic variation (CGV) that has no effect in the wild-type but that enhances or suppresses the effects of rare disruptions to gene function. Here, we adapted a classical modifier screen to interrogate the alleles segregating in natural populations of Caenorhabditis elegans: we induced gene knockdowns and used quantitative genetic methodology to examine how segregating variants modify the penetrance of embryonic lethality. Each perturbation revealed CGV, indicating that wild-type genomes harbor myriad genetic modifiers that may have little effect individually but which in aggregate can dramatically influence penetrance. Phenotypes were mediated by many modifiers, indicating high polygenicity, but the alleles tend to act very specifically, indicating low pleiotropy. Our findings demonstrate the extent of conditional functionality in complex trait architecture.

Indexed as

Embryonic DevelopmentAnimalsCaenorhabditis elegansGenetic VariationMultifactorial InheritancePhenotypeC. eleganscryptic genetic variationevolutionary biologygenetic backgroundgenomicsmodifier variation

Identifiers

PMID26297805
PMCPMC4569889

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.