Evidence map›Paper›PMID 26297385›Full record

ReviewJournal of integrative plant biology2015

Roles of lignin biosynthesis and regulatory genes in plant development.

Jinmi Yoon, Heebak Choi, Gynheung An

Open access · hybridAbstract readReview
In one paragraph

Review in Journal of integrative plant biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed, 240 citations in OpenAlex.

  1. Review
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  12. Rice Cinnamoyl CoA Reductase-like GenePlants (Basel, Switzerland) · 2025
    Article
  13. Article
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  18. The Light-RegulatedInternational journal of molecular sciences · 2025
    Article
  19. Article
  20. A WRKY transcription factor confers broad-spectrum resistance to biotic stresses and yield stability in rice.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article

52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Jinmi YoonCrop Biotech Institute, Kyung Hee University, Yongin, 446-701, Korea.
Heebak ChoiCrop Biotech Institute, Kyung Hee University, Yongin, 446-701, Korea.
Gynheung AnCrop Biotech Institute, Kyung Hee University, Yongin, 446-701, Korea.
Kyung Hee University · KRPohang University of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lignin is an important factor affecting agricultural traits, biofuel production, and the pulping industry. Most lignin biosynthesis genes and their regulatory genes are expressed mainly in the vascular bundles of stems and leaves, preferentially in tissues undergoing lignification. Other genes are poorly expressed during normal stages of development, but are strongly induced by abiotic or biotic stresses. Some are expressed in non-lignifying tissues such as the shoot apical meristem. Alterations in lignin levels affect plant development. Suppression of lignin biosynthesis genes causes abnormal phenotypes such as collapsed xylem, bending stems, and growth retardation. The loss of expression by genes that function early in the lignin biosynthesis pathway results in more severe developmental phenotypes when compared with plants that have mutations in later genes. Defective lignin deposition is also associated with phenotypes of seed shattering or brittle culm. MYB and NAC transcriptional factors function as switches, and some homeobox proteins negatively control lignin biosynthesis genes. Ectopic deposition caused by overexpression of lignin biosynthesis genes or master switch genes induces curly leaf formation and dwarfism.

Indexed as

Genes, RegulatorArabidopsis ProteinsLigninMutationPlant DevelopmentTranscription FactorsArabidopsis ProteinsLigninTranscription FactorsDevelopmentligninrice

Identifiers

PMID26297385
PMCPMC5111759
OpenAlexW1899218122

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.