Evidence map›Paper›PMID 26297139›Full record

ArticlePlant physiology2015

Overexpression of BAX INHIBITOR-1 Links Plasma Membrane Microdomain Proteins to Stress.

Toshiki Ishikawa, Toshihiko Aki, Shuichi Yanagisawa, Hirofumi Uchimiya, Maki Kawai-Yamada

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. γ-Aminobutyric Acid Alleviates Programmed Cell Death in TwoInternational journal of molecular sciences · 2024
    Article
  3. Article
  4. Lipid Rafts and Plant Gravisensitivity.Life (Basel, Switzerland) · 2022
    Review
  5. Article
  6. Review
  7. Review
  8. Organization and dynamics of functional plant membrane microdomains.Cellular and molecular life sciences : CMLS · 2020
    Review
  9. Review
  10. Plant-UniquePlants (Basel, Switzerland) · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Melatonin restricts Pb-induced PCD by enhancing BI-1 expression in tobacco suspension cells.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2016
    Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Toshiki IshikawaGraduate School of Science and Engineering (T.I., M.K.-Y.) and Institute for Environmental Science and Technology (H.U., M.K.-Y.), Saitama University, Saitama City, Saitama 338-8570, Japan; andGraduate School of Agricultural and Life Sciences (T.A., S.Y.) and Biotechnology Research Center (S.Y.), University of Tokyo, Bunkyo-ku, Tokyo 113-8657, Japan.
Toshihiko AkiGraduate School of Science and Engineering (T.I., M.K.-Y.) and Institute for Environmental Science and Technology (H.U., M.K.-Y.), Saitama University, Saitama City, Saitama 338-8570, Japan; andGraduate School of Agricultural and Life Sciences (T.A., S.Y.) and Biotechnology Research Center (S.Y.), University of Tokyo, Bunkyo-ku, Tokyo 113-8657, Japan.
Shuichi YanagisawaGraduate School of Science and Engineering (T.I., M.K.-Y.) and Institute for Environmental Science and Technology (H.U., M.K.-Y.), Saitama University, Saitama City, Saitama 338-8570, Japan; andGraduate School of Agricultural and Life Sciences (T.A., S.Y.) and Biotechnology Research Center (S.Y.), University of Tokyo, Bunkyo-ku, Tokyo 113-8657, Japan.
Hirofumi UchimiyaGraduate School of Science and Engineering (T.I., M.K.-Y.) and Institute for Environmental Science and Technology (H.U., M.K.-Y.), Saitama University, Saitama City, Saitama 338-8570, Japan; andGraduate School of Agricultural and Life Sciences (T.A., S.Y.) and Biotechnology Research Center (S.Y.), University of Tokyo, Bunkyo-ku, Tokyo 113-8657, Japan.
Maki Kawai-YamadaGraduate School of Science and Engineering (T.I., M.K.-Y.) and Institute for Environmental Science and Technology (H.U., M.K.-Y.), Saitama University, Saitama City, Saitama 338-8570, Japan; andGraduate School of Agricultural and Life Sciences (T.A., S.Y.) and Biotechnology Research Center (S.Y.), University of Tokyo, Bunkyo-ku, Tokyo 113-8657, Japan mkawai@mail.saitama-u.ac.jp.
Saitama University · JPThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BAX INHIBITOR-1 (BI-1) is a cell death suppressor widely conserved in plants and animals. Overexpression of BI-1 enhances tolerance to stress-induced cell death in plant cells, although the molecular mechanism behind this enhancement is unclear. We recently found that Arabidopsis (Arabidopsis thaliana) BI-1 is involved in the metabolism of sphingolipids, such as the synthesis of 2-hydroxy fatty acids, suggesting the involvement of sphingolipids in the cell death regulatory mechanism downstream of BI-1. Here, we show that BI-1 affects cell death-associated components localized in sphingolipid-enriched microdomains of the plasma membrane in rice (Oryza sativa) cells. The amount of 2-hydroxy fatty acid-containing glucosylceramide increased in the detergent-resistant membrane (DRM; a biochemical counterpart of plasma membrane microdomains) fraction obtained from BI-1-overexpressing rice cells. Comparative proteomics analysis showed quantitative changes of DRM proteins in BI-1-overexpressing cells. In particular, the protein abundance of FLOTILLIN HOMOLOG (FLOT) and HYPERSENSITIVE-INDUCED REACTION PROTEIN3 (HIR3) markedly decreased in DRM of BI-1-overexpressing cells. Loss-of-function analysis demonstrated that FLOT and HIR3 are required for cell death by oxidative stress and salicylic acid, suggesting that the decreased levels of these proteins directly contribute to the stress-tolerant phenotypes in BI-1-overexpressing rice cells. These findings provide a novel biological implication of plant membrane microdomains in stress-induced cell death, which is negatively modulated by BI-1 overexpression via decreasing the abundance of a set of key proteins involved in cell death.

Indexed as

Arabidopsis ProteinsCell DeathGene Expression Regulation, PlantGlucosylceramidesMembrane MicrodomainsMembrane ProteinsOryzaOxidative StressPlant ProteinsPlants, Genetically ModifiedProteomicsSalicylic AcidSphingolipidsStress, PhysiologicalArabidopsis ProteinsATBI-1 protein, ArabidopsisGlucosylceramidesMembrane ProteinsPlant ProteinsSalicylic AcidSphingolipids

Identifiers

PMID26297139
PMCPMC4587443
OpenAlexW2147590862

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.