Evidence map›Paper›PMID 26296345›Full record

ArticleMicrobial cell factories2015

Developing a high-throughput screening method for threonine overproduction based on an artificial promoter.

Ya'nan Liu, Qinggang Li, Ping Zheng, Zhidan Zhang, Yongfei Liu, Cunmin Sun, Guoqiang Cao, Wenjuan Zhou, Xiaowei Wang, Dawei Zhang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Microbial cell factories, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 72 citations in OpenAlex.

  1. Article
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  5. Transcription factor-based biosensors for screening and dynamic regulation.Frontiers in bioengineering and biotechnology · 2023
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  6. Recent trends in biocatalysis.Chemical Society reviews · 2021
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  8. Inference of Regulatory System for TAG Biosynthesis inBioengineering (Basel, Switzerland) · 2020
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  13. Tools and systems for evolutionary engineering of biomolecules and microorganisms.Journal of industrial microbiology & biotechnology · 2019
    Review
  14. Article
  15. Article
  16. Enhanced production of l-lactic acid byEngineering in life sciences · 2018
    Article
  17. Review
  18. In vivo biosensors: mechanisms, development, and applications.Journal of industrial microbiology & biotechnology · 2018
    Article
  19. A Novel Corynebacterium glutamicum l-Glutamate Exporter.Applied and environmental microbiology · 2018
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Ya'nan LiuCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300222, People's Republic of China. lyn8952@163.com.
Qinggang LiKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. li_qg@tib.cas.cn.
Ping ZhengKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. zheng_p@tib.cas.cn.
Zhidan ZhangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. zhang_zd@tib.cas.cn.
Yongfei LiuKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. liu_yf@tib.cas.cn.
Cunmin SunKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. sun_cm@tib.cas.cn.
Guoqiang CaoKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. cao_gq@tib.cas.cn.
Wenjuan ZhouKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. zhou_wj@tib.cas.cn.
Xiaowei WangSchool of Pharmaceutical Sciences, Nanjing Tech University, Nanjing, 211800, People's Republic of China. 1255653441@qq.com.
Dawei ZhangKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. zhang_dw@tib.cas.cn.
Tongcun ZhangCollege of Biotechnology, Tianjin University of Science and Technology, Tianjin, 300222, People's Republic of China. tony@tust.edu.cn.
Jibin SunKey Laboratory of Systems Microbial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. sun_jb@tib.cas.cn.
Yanhe MaTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, 300308, People's Republic of China. ma_yh@tib.cas.cn.
Chinese Academy of Sciences · CNTianjin University of Science and Technology · CNNanjing Tech University · CN

Funding

NIAAA NIH HHS L40 AA023402
6 · The paper itself

Abstract

backgroundL-Threonine is an important amino acid for animal feed. Though the industrial fermentation technology of threonine achieved a very high level, there is still significant room to further improve the industrial strains. The biosensor-based high-throughput screening (HTS) technology has demonstrated its powerful applications. Unfortunately, for most of valuable fine chemicals such as threonine, a HTS system has not been established mainly due to the absence of a suitable biosensor. In this study, we developed a HTS method to gain high-yielding threonine-producing strains.

resultsNovel threonine sensing promoters including cysJp and cysHp were discovered by proteomic analyses of Escherichia coli in response to extracellular threonine challenges. The HTS method was constructed using a device composed of the fused cysJp and cysHp as a promoter and a linked enhanced green fluorescent protein gene as a reporter. More than 400 strains were selected with fluorescence activated cell sorting technology from a library of 20 million mutants and tested within 1 week. Thirty-four mutants have higher productivities than the starting industrial producer. One mutant produced 17.95 % more threonine in a 5-L jar fermenter.

conclusionsThis method should play a functional role for continuous improvement of threonine industry. Additionally, the threonine sensor construction using promoters obtained by proteomics analyses is so convenient that it would be easily extended to develop HTS models for other biochemicals.

Indexed as

Promoter Regions, GeneticBioreactorsEscherichia coliFlow CytometryGenetic EngineeringHigh-Throughput Screening AssaysProteomicsThreonineThreonine

Identifiers

PMID26296345
PMCPMC4546291
OpenAlexW2103879007

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.