Evidence map›Paper›PMID 26295339›Full record

ArticlePloS one2015

FBG1 Is the Final Arbitrator of A1AT-Z Degradation.

John H Wen, Hsiang Wen, Katherine N Gibson-Corley, Kevin A Glenn

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

John H WenYale University, New Haven, CT, United States of America.
Hsiang WenDepartment of Internal Medicine, Carver College of Medicine, University of Iowa, Iowa City, IA, United States of America.
Katherine N Gibson-CorleyDepartment of Pathology, Carver College of Medicine, University of Iowa, Iowa City, IA, United States of America.
Kevin A GlennDepartment of Internal Medicine, Carver College of Medicine, University of Iowa, Iowa City, IA, United States of America; VA Medical Center, Iowa City, IA, United States of America.
University of Iowa · USYale University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alpha-1 antitrypsin deficiency is the leading cause of childhood liver failure and one of the most common lethal genetic diseases. The disease-causing mutant A1AT-Z fails to fold correctly and accumulates in the endoplasmic reticulum (ER) of the liver, resulting in hepatic fibrosis and hepatocellular carcinoma in a subset of patients. Furthermore, A1AT-Z sequestration in hepatocytes leads to a reduction in A1AT secretion into the serum, causing panacinar emphysema in adults. The purpose of this work was to elucidate the details by which A1AT-Z is degraded in hepatic cell lines. We identified the ubiquitin ligase FBG1, which has been previously shown to degrade proteins by both the ubiquitin proteasome pathway and autophagy, as being key to A1AT-Z degradation. Using chemical and genetic approaches we show that FBG1 degrades A1AT-Z through both the ubiquitin proteasome system and autophagy. Overexpression of FBG1 decreases the half-life of A1AT-Z and knocking down FBG1 in a hepatic cell line, and in mice results in an increase in ATAT. Finally, we show that FBG1 degrades A1AT-Z through a Beclin1-dependent arm of autophagy. In our model, FBG1 acts as a safety ubiquitin ligase, whose function is to re-ubiquitinate ER proteins that have previously undergone de-ubiquitination to ensure they are degraded.

Indexed as

alpha 1-Antitrypsinalpha 1-Antitrypsin DeficiencyAnimalsApoptosis Regulatory ProteinsAutophagyBeclin-1Cell Line, TumorDisease Models, AnimalEndoplasmic ReticulumFemaleGene Expression RegulationHalf-LifeHepatocytesHumansMembrane ProteinsMicealpha 1-AntitrypsinApoptosis Regulatory ProteinsBeclin-1BECN1 protein, humanMembrane ProteinsProteasome Endopeptidase ComplexRNA, Small InterferingSKP Cullin F-Box Protein Ligases

Identifiers

PMID26295339
PMCPMC4546667
OpenAlexW1861552098

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.