Evidence map›Paper›PMID 26291024›Full record

ArticlemAbs2015

Toward the complete characterization of host cell proteins in biotherapeutics via affinity depletions, LC-MS/MS, and multivariate analysis.

James A Madsen, Victor Farutin, Theresa Carbeau, Steve Wudyka, Yan Yin, Stephen Smith, James Anderson, Ishan Capila

Open access · goldAbstract read
In one paragraph

Article in mAbs, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Other Techniques.Advances in biochemical engineering/biotechnology · 2026
    Review
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  12. A Highly Efficient Xylan-Utilization System inFrontiers in microbiology · 2018
    Article
  13. Article
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  15. Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

James A Madsena Momenta Pharmaceuticals ; Cambridge , MA USA.
Victor Farutina Momenta Pharmaceuticals ; Cambridge , MA USA.
Theresa Carbeaua Momenta Pharmaceuticals ; Cambridge , MA USA.
Steve Wudykaa Momenta Pharmaceuticals ; Cambridge , MA USA.
Yan Yina Momenta Pharmaceuticals ; Cambridge , MA USA.
Stephen Smitha Momenta Pharmaceuticals ; Cambridge , MA USA.
James Andersona Momenta Pharmaceuticals ; Cambridge , MA USA.
Ishan Capilaa Momenta Pharmaceuticals ; Cambridge , MA USA.
Momenta Pharmaceuticals (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Host cell protein (HCP) impurities are generated by the host organism during the production of therapeutic recombinant proteins, and are difficult to remove completely. Though commonly present in small quantities, if levels are not controlled, HCPs can potentially reduce drug efficacy and cause adverse patient reactions. A high resolution approach for thorough HCP characterization of therapeutic monoclonal antibodies is presented herein. In this method, antibody samples are first depleted via affinity enrichment (e.g., Protein A, Protein L) using milligram quantities of material. The HCP-containing flow-through is then enzymatically digested, analyzed using nano-UPLC-MS/MS, and proteins are identified through database searching. Nearly 700 HCPs were identified from samples with very low total HCP levels (< 1 ppm to ∼ 10 ppm) using this method. Quantitation of individual HCPs was performed using normalized spectral counting as the number of peptide spectrum matches (PSMs) per protein is proportional to protein abundance. Multivariate analysis tools were utilized to assess similarities between HCP profiles by: 1) quantifying overlaps between HCP identities; and 2) comparing correlations between individual protein abundances as calculated by spectral counts. Clustering analysis using these measures of dissimilarity between HCP profiles enabled high resolution differentiation of commercial grade monoclonal antibody samples generated from different cell lines, cell culture, and purification processes.

Indexed as

AnimalsAntibodies, MonoclonalCHO CellsChromatography, LiquidCluster AnalysisCricetinaeCricetulusHumansMultivariate AnalysisProteomeProteomicsRecombinant ProteinsReproducibility of ResultsStaphylococcal Protein ATandem Mass SpectrometryTrypsinAntibodies, MonoclonalProteomeRecombinant ProteinsStaphylococcal Protein ATrypsinaffinityhost cell proteinsmass spectrometrymonoclonal antibodyproteomics

Identifiers

PMID26291024
PMCPMC4966512
OpenAlexW1845318990

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.