Evidence map›Paper›PMID 26290591›Full record

ArticleThe Journal of experimental biology2015

Probability distributions of whisker-surface contact: quantifying elements of the rat vibrissotactile natural scene.

Jennifer A Hobbs, R Blythe Towal, Mitra J Z Hartmann

Abstract read
In one paragraph

Article in The Journal of experimental biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A dynamical model for generating synthetic data to quantify active tactile sensing behavior in the rat.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  6. Whisker Vibrations and the Activity of Trigeminal Primary Afferents in Response to Airflow.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2019
    Article
  7. Article
  8. Neural Coding of Whisker-Mediated Touch in Primary Somatosensory Cortex Is Altered Following Early Blindness.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
    Article
  9. Article
  10. Whisking mechanics and active sensing.Current opinion in neurobiology · 2016
    Review
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Jennifer A HobbsDepartment of Physics and Astronomy, Northwestern University, Evanston, IL 60208, USA.
R Blythe TowalDepartment of Biomedical Engineering, Northwestern University, Evanston, IL 60208, USA.
Mitra J Z HartmannDepartment of Biomedical Engineering, Northwestern University, Evanston, IL 60208, USA Department of Mechanical Engineering, Northwestern University, Evanston, IL 60208, USA hartmann@northwestern.edu.

Funding

Coding properties of Vibrissal-Responsive Trigeminal Ganglion NeuronsR01NS093585 · NINDS · NORTHWESTERN UNIVERSITY · PI HARTMANN, MITRA J · 2015 to 2019
$1.6M
NINDS NIH HHS R01 NS093585
6 · The paper itself

Abstract

Analysis of natural scene statistics has been a powerful approach for understanding neural coding in the auditory and visual systems. In the field of somatosensation, it has been more challenging to quantify the natural tactile scene, in part because somatosensory signals are so tightly linked to the animal's movements. The present work takes a step towards quantifying the natural tactile scene for the rat vibrissal system by simulating rat whisking motions to systematically investigate the probabilities of whisker-object contact in naturalistic environments. The simulations permit an exhaustive search through the complete space of possible contact patterns, thereby allowing for the characterization of the patterns that would most likely occur during long sequences of natural exploratory behavior. We specifically quantified the probabilities of 'concomitant contact', that is, given that a particular whisker makes contact with a surface during a whisk, what is the probability that each of the other whiskers will also make contact with the surface during that whisk? Probabilities of concomitant contact were quantified in simulations that assumed increasingly naturalistic conditions: first, the space of all possible head poses; second, the space of behaviorally preferred head poses as measured experimentally; and third, common head poses in environments such as cages and burrows. As environments became more naturalistic, the probability distributions shifted from exhibiting a 'row-wise' structure to a more diagonal structure. Results also reveal that the rat appears to use motor strategies (e.g. head pitches) that generate contact patterns that are particularly well suited to extract information in the presence of uncertainty.

Indexed as

AnimalsBiomechanical PhenomenaComputer SimulationExploratory BehaviorFemaleHead MovementsProbabilityRatsRats, Long-EvansTouchVibrissaeVideo RecordingActive touchExplorationMechanicsNatural scene statisticsTactileTrigeminalVibrissotactileWhisker

Identifiers

PMID26290591
PMCPMC6514453

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.