Evidence map›Paper›PMID 26290258›Full record

ArticleJournal of computer-aided molecular design2015

Tales from the war on error: the art and science of curating QSAR data.

Marvin Waldman, Robert Fraczkiewicz, Robert D Clark

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of computer-aided molecular design, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Marvin WaldmanSimulations Plus, Inc., 42505 10th Street West, Lancaster, CA, 93534, USA.
Robert FraczkiewiczSimulations Plus, Inc., 42505 10th Street West, Lancaster, CA, 93534, USA.
Robert D ClarkSimulations Plus, Inc., 42505 10th Street West, Lancaster, CA, 93534, USA. bob@simulations-plus.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Curating the data underlying quantitative structure-activity relationship models is a never-ending struggle. Some curation can now be automated but much cannot, especially where data as complex as those pertaining to molecular absorption, distribution, metabolism, excretion, and toxicity are concerned (vide infra). The authors discuss some particularly challenging problem areas in terms of specific examples involving experimental context, incompleteness of data, confusion of units, problematic nomenclature, tautomerism, and misapplication of automated structure recognition tools.

Indexed as

Data CurationQuantitative Structure-Activity RelationshipChlorpromazineCytochrome P-450 Enzyme SystemData AccuracyIsomerismMethylergonovineMidazolamMolecular StructureTerminology as TopicThermodynamicsTransition Temperature4-hydroxymidazolamChlorpromazineCytochrome P-450 Enzyme SystemMethylergonovineMidazolamAutomated structure recognitionCytochrome P450Data curationMetabolismNomenclatureQSARTautomerism

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.