Evidence map›Paper›PMID 26290094›Full record

ArticleBreast cancer research : BCR2015

Micro-anatomical quantitative optical imaging: toward automated assessment of breast tissues.

Jessica L Dobbs, Jenna L Mueller, Savitri Krishnamurthy, Dongsuk Shin, Henry Kuerer, Wei Yang, Nirmala Ramanujam, Rebecca Richards-Kortum

Abstract read
In one paragraph

Article in Breast cancer research : BCR, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jessica L DobbsDepartment of Bioengineering, Rice University, 6500 Main Street, BRC 502, Houston, TX, 77030, USA. jessica.l.dobbs@gmail.com.
Jenna L MuellerDepartment of Biomedical Engineering, Duke University, 101 Science Drive, Room 136 Hudson Hall, Box 90281, Durham, NC, 27708, USA. jenna.mueller@duke.edu.
Savitri KrishnamurthyDepartment of Pathology, University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Unit 1350, Houston, TX, 77030, USA. skrishna@mdanderson.org.
Dongsuk ShinDepartment of Bioengineering, Rice University, 6500 Main Street, BRC 502, Houston, TX, 77030, USA. biomechanicalengineer@gmail.com.
Henry KuererDepartment of Surgical Oncology, University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Unit 0444, Houston, TX, 77030, USA. hkuerer@mdanderson.org.
Wei YangDepartment of Diagnostic Radiology, University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Unit 1350, Houston, TX, 77030, USA. wyang@mdanderson.org.
Nirmala RamanujamDepartment of Biomedical Engineering, Duke University, 101 Science Drive, Room 136 Hudson Hall, Box 90281, Durham, NC, 27708, USA. nimmi@duke.edu.
Rebecca Richards-KortumDepartment of Bioengineering, Rice University, 6500 Main Street, BRC 502, Houston, TX, 77030, USA. rkortum@rice.edu.

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
NIBIB NIH HHS 1R01EB01157
6 · The paper itself

Abstract

introductionPathologists currently diagnose breast lesions through histologic assessment, which requires fixation and tissue preparation. The diagnostic criteria used to classify breast lesions are qualitative and subjective, and inter-observer discordance has been shown to be a significant challenge in the diagnosis of selected breast lesions, particularly for borderline proliferative lesions. Thus, there is an opportunity to develop tools to rapidly visualize and quantitatively interpret breast tissue morphology for a variety of clinical applications.

methodsToward this end, we acquired images of freshly excised breast tissue specimens from a total of 34 patients using confocal fluorescence microscopy and proflavine as a topical stain. We developed computerized algorithms to segment and quantify nuclear and ductal parameters that characterize breast architectural features. A total of 33 parameters were evaluated and used as input to develop a decision tree model to classify benign and malignant breast tissue. Benign features were classified in tissue specimens acquired from 30 patients and malignant features were classified in specimens from 22 patients.

resultsThe decision tree model that achieved the highest accuracy for distinguishing between benign and malignant breast features used the following parameters: standard deviation of inter-nuclear distance and number of duct lumens. The model achieved 81 % sensitivity and 93 % specificity, corresponding to an area under the curve of 0.93 and an overall accuracy of 90 %. The model classified IDC and DCIS with 92 % and 96 % accuracy, respectively. The cross-validated model achieved 75 % sensitivity and 93 % specificity and an overall accuracy of 88 %.

conclusionsThese results suggest that proflavine staining and confocal fluorescence microscopy combined with image analysis strategies to segment morphological features could potentially be used to quantitatively diagnose freshly obtained breast tissue at the point of care without the need for tissue preparation.

Indexed as

AlgorithmsBreastBreast NeoplasmsContrast MediaDiagnosis, DifferentialFemaleHumansMicroscopy, ConfocalOptical ImagingSensitivity and SpecificityContrast Media

Identifiers

PMID26290094
PMCPMC4545917

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.