Evidence map›Paper›PMID 26290078›Full record

ArticleVirology journal2015

Differential expression of micrornas in porcine parvovirus infected porcine cell line.

Xinqiong Li, Ling Zhu, Xiao Liu, Xiangang Sun, Yuanchen Zhou, Qiaoli Lang, Ping Li, Yuhan Cai, Xiaogai Qiao, Zhiwen Xu

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Xinqiong LiAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. lxqll954101@163.com.
Ling ZhuAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. abtczl72@126.com.
Xiao LiuAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. 502401695@qq.com.
Xiangang SunAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. sun.xian.gang@163.com.
Yuanchen ZhouAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. abtczyc@163.com.
Qiaoli LangAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. 308307923@qq.com.
Ping LiAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. lipinga104@163.com.
Yuhan CaiAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. 429197524@qq.com.
Xiaogai QiaoAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. 1434143812@qq.com.
Zhiwen XuAnimal Biotechnology Center, College of Veterinary Medicine, Sichuan Agricultural University, Wenjiang, Chengdu, China. abtcxzw@126.com.
Sichuan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPorcine parvovirus (PPV), a member of the Parvoviridae family, causes great economic loss in the swine industry worldwide. MicroRNAs (miRNAs) are a class of non-protein-coding genes that play many diverse and complex roles in viral infections. FINDING: Aiming to determine the impact of PPV infections on the cellular miRNAome, we used high-throughput sequencing to sequence two miRNA libraries prepared from porcine kidney 15 (PK-15) cells under normal conditions and during PPV infection. There was differential miRNA expression between the uninfected and infected cells: 65 miRNAs were upregulated and 128 miRNAs were downregulated. We detected the expression of miR-10b, miR-20a, miR-19b, miR-181a, miR-146b, miR-18a, and other previously identified immune-related miRNAs. Gene Ontology analysis and KEGG function annotations of the host target genes suggested that the miRNAs are involved in complex cellular pathways, including cellular metabolic processes, immune system processes, and gene expression.

conclusionsThese data suggest that a large group of miRNAs is expressed in PK-15 cells and that some miRNAs were altered in PPV-infected PK-15 cells. A number of microRNAs play an important role in regulating immune-related gene expression. Our findings should help with the development of new control strategies to prevent or treat PPV infections in swine.

Indexed as

Gene Expression ProfilingHost-Pathogen InteractionsAnimalsCell LineGene OntologyHigh-Throughput Nucleotide SequencingMicroRNAsParvovirus, PorcineSwineMicroRNAs

Identifiers

PMID26290078
PMCPMC4545981
OpenAlexW2127595016

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.