Evidence map›Paper›PMID 26289666›Full record

ArticleGene therapy2016

CRISPR/Cas9 DNA cleavage at SNP-derived PAM enables both in vitro and in vivo KRT12 mutation-specific targeting.

D G Courtney, J E Moore, S D Atkinson, E Maurizi, E H A Allen, D M L Pedrioli, W H I McLean, M A Nesbit, C B T Moore

Open access · hybridAbstract read
In one paragraph

Article in Gene therapy, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 125 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. A Novel Pathogenic Variant in theJournal of clinical medicine · 2025
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

D G CourtneySchool of Biomedical Sciences, University of Ulster, Coleraine, Northern Ireland, UK.
J E MooreSchool of Biomedical Sciences, University of Ulster, Coleraine, Northern Ireland, UK.
S D AtkinsonSchool of Biomedical Sciences, University of Ulster, Coleraine, Northern Ireland, UK.
E MauriziSchool of Biomedical Sciences, University of Ulster, Coleraine, Northern Ireland, UK.
E H A AllenCentre for Dermatology and Genetic Medicine, Colleges of Life Sciences and Medicine, Dentistry and Nursing, University of Dundee, Dundee, Scotland, UK.
D M L PedrioliCentre for Dermatology and Genetic Medicine, Colleges of Life Sciences and Medicine, Dentistry and Nursing, University of Dundee, Dundee, Scotland, UK.
W H I McLeanCentre for Dermatology and Genetic Medicine, Colleges of Life Sciences and Medicine, Dentistry and Nursing, University of Dundee, Dundee, Scotland, UK.
M A NesbitSchool of Biomedical Sciences, University of Ulster, Coleraine, Northern Ireland, UK.
C B T MooreSchool of Biomedical Sciences, University of Ulster, Coleraine, Northern Ireland, UK.
University of Ulster · GBUniversity of Dundee · GBBelfast City Hospital · GB

Funding

Medical Research Council G0801742Medical Research Council G0802780Medical Research Council MR/L020246/1Medical Research Council MR/L020246/2
6 · The paper itself

Abstract

CRISPR/Cas9-based therapeutics hold the possibility for permanent treatment of genetic disease. The potency and specificity of this system has been used to target dominantly inherited conditions caused by heterozygous missense mutations through inclusion of the mutated base in the short-guide RNA (sgRNA) sequence. This research evaluates a novel approach for targeting heterozygous single-nucleotide polymorphisms (SNPs) using CRISPR/Cas9. We determined that a mutation within KRT12, which causes Meesmann's epithelial corneal dystrophy (MECD), leads to the occurrence of a novel protospacer adjacent motif (PAM). We designed an sgRNA complementary to the sequence adjacent to this SNP-derived PAM and evaluated its potency and allele specificity both in vitro and in vivo. This sgRNA was found to be highly effective at reducing the expression of mutant KRT12 mRNA and protein in vitro. To assess its activity in vivo we injected a combined Cas9/sgRNA expression construct into the corneal stroma of a humanized MECD mouse model. Sequence analysis of corneal genomic DNA revealed non-homologous end-joining repair resulting in frame-shifting deletions within the mutant KRT12 allele. This study is the first to demonstrate in vivo gene editing of a heterozygous disease-causing SNP that results in a novel PAM, further highlighting the potential for CRISPR/Cas9-based therapeutics.

Indexed as

CRISPR-Cas SystemsDNA CleavageGene TargetingPolymorphism, Single NucleotideAllelesAnimalsBase SequenceFemaleGenetic TherapyHeterozygoteKeratin-12MiceMice, Inbred C57BLModels, AnimalMolecular Sequence DataMutation, MissenseKeratin-12KRT12 protein, mouse

Identifiers

PMID26289666
PMCPMC4705418
OpenAlexW1614724436

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.