Evidence map›Paper›PMID 26288700›Full record

ReviewComputational and structural biotechnology journal2015

Mini-review: Strategies for Variation and Evolution of Bacterial Antigens.

Janet Foley

Open access · goldAbstract readReview
In one paragraph

Review in Computational and structural biotechnology journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. RecombinantPathogens (Basel, Switzerland) · 2023
    Article
  6. Lyme Disease Pathogenesis.Current issues in molecular biology · 2021
    Review
  7. Article
  8. Phylogenetic diversity inJournal of oral microbiology · 2020
    Article
  9. Review
  10. Article
  11. Genomic blueprint of a relapsing fever pathogen in 15th century Scandinavia.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Frontiers in cellular and infection microbiology · 2017
    Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Janet Foley1320 Tupper Hall, Veterinary Medicine and Epidemiology, UC Davis, Davis, CA 95616, United States.
University of California, Davis · US

Funding

Evolution of chronic infection in Anasplasma phagocytophilumR01GM081714 · NIGMS · UNIVERSITY OF FLORIDA · PI BARBET, ANTHONY F. · 2007 to 2010
$1.7M
NIGMS NIH HHS R01 GM081714
6 · The paper itself

Abstract

Across the eubacteria, antigenic variation has emerged as a strategy to evade host immunity. However, phenotypic variation in some of these antigens also allows the bacteria to exploit variable host niches as well. The specific mechanisms are not shared-derived characters although there is considerable convergent evolution and numerous commonalities reflecting considerations of natural selection and biochemical restraints. Unlike in viruses, mechanisms of antigenic variation in most bacteria involve larger DNA movement such as gene conversion or DNA rearrangement, although some antigens vary due to point mutations or modified transcriptional regulation. The convergent evolution that promotes antigenic variation integrates various evolutionary forces: these include mutations underlying variant production; drift which could remove alleles especially early in infection or during life history phases in arthropod vectors (when the bacterial population size goes through a bottleneck); selection not only for any particular variant but also for the mechanism for the production of variants (i.e., selection for mutability); and overcoming negative selection against variant production. This review highlights the complexities of drivers of antigenic variation, in particular extending evaluation beyond the commonly cited theory of immune evasion. A deeper understanding of the diversity of purpose and mechanisms of antigenic variation in bacteria will contribute to greater insight into bacterial pathogenesis, ecology and coevolution with hosts.

Indexed as

Homologous recombinationHypermutabilityImmune evasionPseudogene

Identifiers

PMID26288700
PMCPMC4534519
OpenAlexW948492476

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.